| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121610593
Identifier: 121610593
GI number: 121610593
Start: 4054508
End: 4055107
Strand: Direct
Name: 121610593
Synonym: Veis_3666
Alternate gene names: NA
Gene position: 4054508-4055107 (Clockwise)
Preceding gene: 121610590
Following gene: 121610594
Centisome position: 72.83
GC content: 64.83
Gene sequence:
>600_bases ATGCCGACCAGCCACCGCGACCTCGAAACCTCCGGCACGATGCGCGTGCGCATCGCCATCCGCCCCGGGGACTGGGGCCT GGATGCCGTGTACGAGCACCTGGCCGATCTGCCTGACGAAAAATCGCGCGCTGTACTGCTGCGCAAAATCCTGATGCGAA ATCAAGGGGTTTCGCGCTCCACCCCCTCAGCAGCAGCGCGCCCGGCGATCAGCGTGCGCGTGAGCATCAGCGAACGGGAT GCCGCGCTGGATGAATTGCGCCAGACCCTGCGGTCGCTGCCCTCGGGACAGCGAGGCGGCTACCTCAAGAGCGTCCTCCA GACGATCCAACTGGGCGGCCCCTGGGCACCAACGGCCATTGCAGCACTACAGCCATCACTGCAGCCATCCACCGTCGTCC CGGCACGGGCGACACCCCGGCAGCGACATGCCGATCCAGCCTCGCAAGAACCGCCCGATCGCACGCTGCAAGAGATGACG CCAATCGCGCCTGCGAGCATCCCCCCGGCAGATGTTTGTCTGGACAAAGCCAATCGCACGGCCAAATCGATCCATTTCAA GAACCGCATGCGTGAAGCAGCGCGCATGCTCGAAGTCTGA
Upstream 100 bases:
>100_bases GTGTCCAATTTTTGGACTGATCAGTCCTAATTATGGACTAATTAGTCCAAATTGGCCAGTTTAGTCCAATTTCTGGACAC GAGAAAGTGTACCAAAAGAA
Downstream 100 bases:
>100_bases AAACCCCCACTGCCAACAATCAAAGGAAATCTCATGCCTGATGTGATCGCAATCGATGTCGGCTACGGAAATACCAAGCC TGTCTGGAGTCACGATCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPTSHRDLETSGTMRVRIAIRPGDWGLDAVYEHLADLPDEKSRAVLLRKILMRNQGVSRSTPSAAARPAISVRVSISERD AALDELRQTLRSLPSGQRGGYLKSVLQTIQLGGPWAPTAIAALQPSLQPSTVVPARATPRQRHADPASQEPPDRTLQEMT PIAPASIPPADVCLDKANRTAKSIHFKNRMREAARMLEV
Sequences:
>Translated_199_residues MPTSHRDLETSGTMRVRIAIRPGDWGLDAVYEHLADLPDEKSRAVLLRKILMRNQGVSRSTPSAAARPAISVRVSISERD AALDELRQTLRSLPSGQRGGYLKSVLQTIQLGGPWAPTAIAALQPSLQPSTVVPARATPRQRHADPASQEPPDRTLQEMT PIAPASIPPADVCLDKANRTAKSIHFKNRMREAARMLEV >Mature_198_residues PTSHRDLETSGTMRVRIAIRPGDWGLDAVYEHLADLPDEKSRAVLLRKILMRNQGVSRSTPSAAARPAISVRVSISERDA ALDELRQTLRSLPSGQRGGYLKSVLQTIQLGGPWAPTAIAALQPSLQPSTVVPARATPRQRHADPASQEPPDRTLQEMTP IAPASIPPADVCLDKANRTAKSIHFKNRMREAARMLEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21761; Mature: 21630
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSHRDLETSGTMRVRIAIRPGDWGLDAVYEHLADLPDEKSRAVLLRKILMRNQGVSRS CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TPSAAARPAISVRVSISERDAALDELRQTLRSLPSGQRGGYLKSVLQTIQLGGPWAPTAI CCCHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH AALQPSLQPSTVVPARATPRQRHADPASQEPPDRTLQEMTPIAPASIPPADVCLDKANRT HHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH AKSIHFKNRMREAARMLEV HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTSHRDLETSGTMRVRIAIRPGDWGLDAVYEHLADLPDEKSRAVLLRKILMRNQGVSRS CCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TPSAAARPAISVRVSISERDAALDELRQTLRSLPSGQRGGYLKSVLQTIQLGGPWAPTAI CCCHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHH AALQPSLQPSTVVPARATPRQRHADPASQEPPDRTLQEMTPIAPASIPPADVCLDKANRT HHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH AKSIHFKNRMREAARMLEV HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA