| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ate
Identifier: 121610550
GI number: 121610550
Start: 4007944
End: 4008699
Strand: Direct
Name: ate
Synonym: Veis_3623
Alternate gene names: 121610550
Gene position: 4007944-4008699 (Clockwise)
Preceding gene: 121610549
Following gene: 121610551
Centisome position: 72.0
GC content: 64.15
Gene sequence:
>756_bases ATGACGCAACTGAACGACCTTCCGCTGCAGTCCCTGCAGTTTTATGCGACGGCCCCCTACCCCTGCAGTTACTTGCCGCA GCGGCAGGCGCGCTCGCAGGTCGCCACGCCCGGTCACCTGATTCAAAGCGATATTTACTCCGACCTGGTCACCAAGGGGT TTCGCCGCAGCGGCATGTTCACCTACCGGCCGTATTGCGATGGCTGCCAGGCTTGCACGCCGTTGCGGATCGTCGTCGAT GGGTTCCGGCCCGACCGCAGTCAAAAGCGCGCCGTCGCCCGCCACGGCAAGTTGCAGACGCGGGTTTTGCGCCTGTGCTT CGTGCCCGAGCATTACCAGTTGTACCTGCGCTATCAGAACGGGCGCCATGCCGGCGGCGGCATGGACCATGACAGCATCG ACCAGTACACGCAGTTCCTGCTGCAAAGCCGGGTGAACTCGCGCCTGGTGGAGTTCCGTGAGGTCGACGACACCGGCGCC ACCGGCGGGCCGGGCGTGCTGAAGATGGTGTCGCTGCTGGATCTGCTCGACGACGGCCTGTCGGCGGTCTACACCTTCTA CGAGCCCGAGCCGCGTTGCAGTTATGGCACCTACAACGTGCTGTGGCAGATTGCGCAGGCGCGCGCCCTGAGCCTGCCCC ATGTGTACCTGGGCTACTGGATCGCCGTCAGCCCGAAGATGAACTACAAGGCCGGTTTCCATCCGCACGAAATTCTCACC GACGGGCGCTGGCACCGGGTGGACATGCCGCTGTGA
Upstream 100 bases:
>100_bases GCCTGGACCTTCGAGCCCGTATACTGGGACGGGCTGCTCGGGCCGCGCTCCCTTGGCTCCCTTGCCGATCCCTTACGACA TTGACGACGGCTCTTACGGC
Downstream 100 bases:
>100_bases ACCCGCGCGCGCATTTCACAAGCTAAGATGCGGCGGCGTCCGACCCTTTGCCGCTGATGGCCGCCGATGGCGGCATCCGA CCCCTTGCCGCTCATGAAAA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPGHLIQSDIYSDLVTKGFRRSGMFTYRPYCDGCQACTPLRIVVD GFRPDRSQKRAVARHGKLQTRVLRLCFVPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFREVDDTGA TGGPGVLKMVSLLDLLDDGLSAVYTFYEPEPRCSYGTYNVLWQIAQARALSLPHVYLGYWIAVSPKMNYKAGFHPHEILT DGRWHRVDMPL
Sequences:
>Translated_251_residues MTQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPGHLIQSDIYSDLVTKGFRRSGMFTYRPYCDGCQACTPLRIVVD GFRPDRSQKRAVARHGKLQTRVLRLCFVPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFREVDDTGA TGGPGVLKMVSLLDLLDDGLSAVYTFYEPEPRCSYGTYNVLWQIAQARALSLPHVYLGYWIAVSPKMNYKAGFHPHEILT DGRWHRVDMPL >Mature_250_residues TQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPGHLIQSDIYSDLVTKGFRRSGMFTYRPYCDGCQACTPLRIVVDG FRPDRSQKRAVARHGKLQTRVLRLCFVPEHYQLYLRYQNGRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFREVDDTGAT GGPGVLKMVSLLDLLDDGLSAVYTFYEPEPRCSYGTYNVLWQIAQARALSLPHVYLGYWIAVSPKMNYKAGFHPHEILTD GRWHRVDMPL
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_VEREI (A1WNY2)
Other databases:
- EMBL: CP000542 - RefSeq: YP_998357.1 - STRING: A1WNY2 - GeneID: 4693005 - GenomeReviews: CP000542_GR - KEGG: vei:Veis_3623 - NMPDR: fig|391735.5.peg.3343 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: VEIS391735:VEIS_3623-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 28700; Mature: 28569
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPGHLIQSDIYSDLVTKGFRRSGMF CCCCCCCCHHHHHEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACTPLRIVVDGFRPDRSQKRAVARHGKLQTRVLRLCFVPEHYQLYLRYQN EECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEECC GRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFREVDDTGATGGPGVLKMVSLLDLLDDGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SAVYTFYEPEPRCSYGTYNVLWQIAQARALSLPHVYLGYWIAVSPKMNYKAGFHPHEILT HHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHC DGRWHRVDMPL CCCEEEECCCC >Mature Secondary Structure TQLNDLPLQSLQFYATAPYPCSYLPQRQARSQVATPGHLIQSDIYSDLVTKGFRRSGMF CCCCCCCHHHHHEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACTPLRIVVDGFRPDRSQKRAVARHGKLQTRVLRLCFVPEHYQLYLRYQN EECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEECC GRHAGGGMDHDSIDQYTQFLLQSRVNSRLVEFREVDDTGATGGPGVLKMVSLLDLLDDGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SAVYTFYEPEPRCSYGTYNVLWQIAQARALSLPHVYLGYWIAVSPKMNYKAGFHPHEILT HHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCHHHHHC DGRWHRVDMPL CCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA