| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is yghO [C]
Identifier: 121610512
GI number: 121610512
Start: 3960900
End: 3961184
Strand: Direct
Name: yghO [C]
Synonym: Veis_3583
Alternate gene names: 121610512
Gene position: 3960900-3961184 (Clockwise)
Preceding gene: 121610511
Following gene: 121610516
Centisome position: 71.15
GC content: 60.35
Gene sequence:
>285_bases ATGATCGACGTTCTTCCCGGCACCGACCGCCGCCCGACCGACCTTTACATCGACCTGCCTTTCCGGCTCTATCGTCACGA TCCGCTCTGGGTGCCGCCACTGCGCGCCGACATCCGCAAGCTGATGTCGCCGAAAAAGAACCCGCTGTTTGCCGAGGCGG CCATCGAGCACTTTGTTGCATTCAACGAAGCTGGCGTGGTGGTGGGTCGTATCAGCGCGACGATCCACCACGACTACAAC AGCCGCTTTGGCGAGCAGCACGTGTTCTTCGGCTATTTCCGATGA
Upstream 100 bases:
>100_bases ACGGCGGCCGACTGGTTGAGAAGCTGTTCGTGAATCGATACATGAACCGGCTGTTCGAGGCACGCCACCGCAACATGCGC CGCTTGTTGGAGAACATCCC
Downstream 100 bases:
>100_bases CAAACCGCCAACTCTGCTGCAGACCTACAACCTGCCTTACTACCGCACTCTTCTGGAGCGAGCAGGACTCTCGTTAGCTT TTACCTTCAGCACCTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MIDVLPGTDRRPTDLYIDLPFRLYRHDPLWVPPLRADIRKLMSPKKNPLFAEAAIEHFVAFNEAGVVVGRISATIHHDYN SRFGEQHVFFGYFR
Sequences:
>Translated_94_residues MIDVLPGTDRRPTDLYIDLPFRLYRHDPLWVPPLRADIRKLMSPKKNPLFAEAAIEHFVAFNEAGVVVGRISATIHHDYN SRFGEQHVFFGYFR >Mature_94_residues MIDVLPGTDRRPTDLYIDLPFRLYRHDPLWVPPLRADIRKLMSPKKNPLFAEAAIEHFVAFNEAGVVVGRISATIHHDYN SRFGEQHVFFGYFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10968; Mature: 10968
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVLPGTDRRPTDLYIDLPFRLYRHDPLWVPPLRADIRKLMSPKKNPLFAEAAIEHFVA CCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH FNEAGVVVGRISATIHHDYNSRFGEQHVFFGYFR CCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure MIDVLPGTDRRPTDLYIDLPFRLYRHDPLWVPPLRADIRKLMSPKKNPLFAEAAIEHFVA CCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHH FNEAGVVVGRISATIHHDYNSRFGEQHVFFGYFR CCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA