Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610516

Identifier: 121610516

GI number: 121610516

Start: 3963573

End: 3964577

Strand: Direct

Name: 121610516

Synonym: Veis_3587

Alternate gene names: NA

Gene position: 3963573-3964577 (Clockwise)

Preceding gene: 121610512

Following gene: 121610517

Centisome position: 71.2

GC content: 69.05

Gene sequence:

>1005_bases
ATGAAAGCTGCTGCCGACTGCTCGCGCCGCCAGGCGCTGGGCACGGGCCTGGGTTTCGTTGCCACCGCTCTGGCGCCAGG
GGTGGCGGCAGCGCAAGGCCCTGCCGCGTGGCCCGGCAAGGCCGTGACGCTGGTGGTCGGCGCGCCGCCCGGCGGTCAGA
CCGACTTTGCGATCCGGGTGCAGATACCCGGCTTGCAGGCCGCGCTGGGCCAGCCTTGCGTGATCGACAACCGCCCGGGC
GCCGGCGGCAACATCAGCGTCGAGCATGTGCTCAAGGGCCCGAGCGACGGCTACCGCCTGCTGGTGGGCAACGGCGGCAA
CATGACCATGAACCCCCACACCTACCGCAACACACCGATGGTCGACCCGCGCAGGCTGGTGCCGATCGGCCTGCTGCTGC
AGTCGGCGCTGGTGCTCGCAGTGCATCCGGACGTGGGTGCGAAGAACTTCAGCGAGTTGCTCGCCTGGGTCAAGGCGCAG
GACGGCATCGACTACGCCTCCTCCGGGCCTGGCAGTCTCACGCAGGCGGCGATGGAACTGCTGCGCGAGCGCATGGGCCG
GCCGGCGATGACCCACATCGCCTACAAGGGCAGCGCGCCGGCGCTGCACGACTTGATCGCTGGCCGCGTGAAGCTGATGT
TCGACGCGGTGTCGGTCATCGCACCCTTCGTCCGGTCAGGGCAGTTGCGGGCGCTGATGGTCACCAGCGACAGGCGCGTG
CCCGCGCTGGCGCAGGTTCCGACGGCGGACGAACTCGGCCTGAAGGATTTCATCGTCACCTCGTTCATCGGCCTGTACGG
CCCGCCCGGCCTGTCCCCCGAGATCGTCAGGAAGGCCAACGCAGCGCTGAACCAATCGATGGCCGATCCGGTCACGGTCA
AGACGATCACCGATCGCGGCGACGAGCCGGGCGGCGGCACGCCCGAGCGCCTGATGGGCATGACCCACGGGTACTACGAG
ACTTGGAGGCAGGTCGTGCAGGCCAACGATATCCGGGCCGATTGA

Upstream 100 bases:

>100_bases
TGGCCACTTGCAGGCCTGGTTTGCCTCGGGTTATTCCCTGGCTCGGTGCCATTCTTGCCAGCAATAATCGATTGACTCTG
ATGAAAATGGGAGACGACCA

Downstream 100 bases:

>100_bases
GCGCCTGTGCCATGGCGCCCCCGGTTCCCGGACCGTGGGCACCGCGCGGCCGCCCGAAGGCGCCCATACCGTAGCCGAAG
GCAAAGGTTCCCCAGTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKAAADCSRRQALGTGLGFVATALAPGVAAAQGPAAWPGKAVTLVVGAPPGGQTDFAIRVQIPGLQAALGQPCVIDNRPG
AGGNISVEHVLKGPSDGYRLLVGNGGNMTMNPHTYRNTPMVDPRRLVPIGLLLQSALVLAVHPDVGAKNFSELLAWVKAQ
DGIDYASSGPGSLTQAAMELLRERMGRPAMTHIAYKGSAPALHDLIAGRVKLMFDAVSVIAPFVRSGQLRALMVTSDRRV
PALAQVPTADELGLKDFIVTSFIGLYGPPGLSPEIVRKANAALNQSMADPVTVKTITDRGDEPGGGTPERLMGMTHGYYE
TWRQVVQANDIRAD

Sequences:

>Translated_334_residues
MKAAADCSRRQALGTGLGFVATALAPGVAAAQGPAAWPGKAVTLVVGAPPGGQTDFAIRVQIPGLQAALGQPCVIDNRPG
AGGNISVEHVLKGPSDGYRLLVGNGGNMTMNPHTYRNTPMVDPRRLVPIGLLLQSALVLAVHPDVGAKNFSELLAWVKAQ
DGIDYASSGPGSLTQAAMELLRERMGRPAMTHIAYKGSAPALHDLIAGRVKLMFDAVSVIAPFVRSGQLRALMVTSDRRV
PALAQVPTADELGLKDFIVTSFIGLYGPPGLSPEIVRKANAALNQSMADPVTVKTITDRGDEPGGGTPERLMGMTHGYYE
TWRQVVQANDIRAD
>Mature_334_residues
MKAAADCSRRQALGTGLGFVATALAPGVAAAQGPAAWPGKAVTLVVGAPPGGQTDFAIRVQIPGLQAALGQPCVIDNRPG
AGGNISVEHVLKGPSDGYRLLVGNGGNMTMNPHTYRNTPMVDPRRLVPIGLLLQSALVLAVHPDVGAKNFSELLAWVKAQ
DGIDYASSGPGSLTQAAMELLRERMGRPAMTHIAYKGSAPALHDLIAGRVKLMFDAVSVIAPFVRSGQLRALMVTSDRRV
PALAQVPTADELGLKDFIVTSFIGLYGPPGLSPEIVRKANAALNQSMADPVTVKTITDRGDEPGGGTPERLMGMTHGYYE
TWRQVVQANDIRAD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35039; Mature: 35039

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAADCSRRQALGTGLGFVATALAPGVAAAQGPAAWPGKAVTLVVGAPPGGQTDFAIRV
CCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
QIPGLQAALGQPCVIDNRPGAGGNISVEHVLKGPSDGYRLLVGNGGNMTMNPHTYRNTPM
ECCCHHHHCCCCEEECCCCCCCCCEEHHEEECCCCCCCEEEEECCCCEEECCCCCCCCCC
VDPRRLVPIGLLLQSALVLAVHPDVGAKNFSELLAWVKAQDGIDYASSGPGSLTQAAMEL
CCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LRERMGRPAMTHIAYKGSAPALHDLIAGRVKLMFDAVSVIAPFVRSGQLRALMVTSDRRV
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
PALAQVPTADELGLKDFIVTSFIGLYGPPGLSPEIVRKANAALNQSMADPVTVKTITDRG
CHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
DEPGGGTPERLMGMTHGYYETWRQVVQANDIRAD
CCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKAAADCSRRQALGTGLGFVATALAPGVAAAQGPAAWPGKAVTLVVGAPPGGQTDFAIRV
CCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
QIPGLQAALGQPCVIDNRPGAGGNISVEHVLKGPSDGYRLLVGNGGNMTMNPHTYRNTPM
ECCCHHHHCCCCEEECCCCCCCCCEEHHEEECCCCCCCEEEEECCCCEEECCCCCCCCCC
VDPRRLVPIGLLLQSALVLAVHPDVGAKNFSELLAWVKAQDGIDYASSGPGSLTQAAMEL
CCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
LRERMGRPAMTHIAYKGSAPALHDLIAGRVKLMFDAVSVIAPFVRSGQLRALMVTSDRRV
HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
PALAQVPTADELGLKDFIVTSFIGLYGPPGLSPEIVRKANAALNQSMADPVTVKTITDRG
CHHHCCCCCHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC
DEPGGGTPERLMGMTHGYYETWRQVVQANDIRAD
CCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3299368 [H]