| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610509
Identifier: 121610509
GI number: 121610509
Start: 3958913
End: 3960097
Strand: Direct
Name: 121610509
Synonym: Veis_3580
Alternate gene names: NA
Gene position: 3958913-3960097 (Clockwise)
Preceding gene: 121610508
Following gene: 121610510
Centisome position: 71.12
GC content: 69.03
Gene sequence:
>1185_bases ATGCACATCCGTCTTCCGCAGATCGACGGGTCCGTCAAGACCTACGCCCTCAAAGCCAGCCCCATAGCGCCCGCGCCTGC GCCCGCGCCAGCGGCCCGGCCCGGCCCGTTCAACCGCAGCGTCTACGCCGCTGCGCATGTGGTCGTCGACCCGTGGGCCA CGGTCGACCCCTGGGATGCAGCGCCGGTGATCGATTGGGACAGCACGCTGGCTTTCCGTGAACACCTCTACCGGCTCGGC TTCAAAGTCGCCGAGGCCATGGACACCGCGCAGCGCGGCATGGGCCTGGACTGGCCGGTGGCGCGTGAACTGATCCAACG CAGCATCGGCCATGCCCGCGCCGTCGGCGGAGAACTGGCCTGCGGGGTCGGCACCGACCAACTGGCCCCGGGGCCGCAGG TCTCATTGGCCCAGGTCGAGGCCGCCTACCGCGAGCAACTCGGCGTGGTCGAGGCCGAAGGCGGCCGGGTCATCCTGATG GCCAGCCGCGCACTGGCCCGGGCGGCCAACGGCGCCGATGACTACCACGCACTGTATGGCCGCATCCTGAACGATTGCTC GCAGCCGGTGATCCTGCATTGGCTCGGCCCGATGTTCGACCCGGCACTGGCGGCCTACTGGGGTTCGGCCGATCTGGCCA CGGCGCTGGAGACCGTGGCCCGGCTGATTGCCGACAATGCGGCCAAGGTCGAAGGCATCAAGGTCTCCCTGCTCGACGCC CGATGGGAGCTGGAACTGCGCCGCCGCCTGCCCCCGGGCGTGAAGATGTACACCGGCGACGACTTCAACTACGCCGAACT GATGGCCGGCGACGAGGCCGGCCACTCCCACGGCCTGCTGGGCATCTTCGACCCGATCGCCCCGGTGGCCGCCGTAGCGC TGGCGCAACTGGCCGCCGGACGCCCCCGGGAATTTCGCCAACTGCTGGACCCCACGGTGGCCCTGTCGCGCGAAATCTTC CGCGCACCCACCCGCCACTACAAAGCCGGCGTGGTGTTTCTGGCCTGGCTCAACGGCCACCAAGCGCATTTCTCGATGGC CGCAGGGCTGTCATCGGCCCGTGGCCCGGTCCATTACGCGAAGCTGTTCGAGCTGGCCGACGCCTGCGGTGTGCTGTCCA ATCCGGAACTGGCGCTGGCCCGGATGAAGCAGTTTCTGTCGGTGAACTGCGGGATTGCGGGCTGA
Upstream 100 bases:
>100_bases TCGTGCCCTCCTGCAACACCAACGCGCCGACCATCATGGTGGCCGAAAAAGCCGCCGACCACATCCTTGCTCGTCTTTGA CCCAGCCCCTGGAGAACGCC
Downstream 100 bases:
>100_bases GGAATGGCAAAACCCTCGCCGGCTTGTATGGCCGAGGTGATGATGATGGCGCTTGGTGGCGTCAACCGCGACGCCAGCCC AGTGTCGCGTCACCGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MHIRLPQIDGSVKTYALKASPIAPAPAPAPAARPGPFNRSVYAAAHVVVDPWATVDPWDAAPVIDWDSTLAFREHLYRLG FKVAEAMDTAQRGMGLDWPVARELIQRSIGHARAVGGELACGVGTDQLAPGPQVSLAQVEAAYREQLGVVEAEGGRVILM ASRALARAANGADDYHALYGRILNDCSQPVILHWLGPMFDPALAAYWGSADLATALETVARLIADNAAKVEGIKVSLLDA RWELELRRRLPPGVKMYTGDDFNYAELMAGDEAGHSHGLLGIFDPIAPVAAVALAQLAAGRPREFRQLLDPTVALSREIF RAPTRHYKAGVVFLAWLNGHQAHFSMAAGLSSARGPVHYAKLFELADACGVLSNPELALARMKQFLSVNCGIAG
Sequences:
>Translated_394_residues MHIRLPQIDGSVKTYALKASPIAPAPAPAPAARPGPFNRSVYAAAHVVVDPWATVDPWDAAPVIDWDSTLAFREHLYRLG FKVAEAMDTAQRGMGLDWPVARELIQRSIGHARAVGGELACGVGTDQLAPGPQVSLAQVEAAYREQLGVVEAEGGRVILM ASRALARAANGADDYHALYGRILNDCSQPVILHWLGPMFDPALAAYWGSADLATALETVARLIADNAAKVEGIKVSLLDA RWELELRRRLPPGVKMYTGDDFNYAELMAGDEAGHSHGLLGIFDPIAPVAAVALAQLAAGRPREFRQLLDPTVALSREIF RAPTRHYKAGVVFLAWLNGHQAHFSMAAGLSSARGPVHYAKLFELADACGVLSNPELALARMKQFLSVNCGIAG >Mature_394_residues MHIRLPQIDGSVKTYALKASPIAPAPAPAPAARPGPFNRSVYAAAHVVVDPWATVDPWDAAPVIDWDSTLAFREHLYRLG FKVAEAMDTAQRGMGLDWPVARELIQRSIGHARAVGGELACGVGTDQLAPGPQVSLAQVEAAYREQLGVVEAEGGRVILM ASRALARAANGADDYHALYGRILNDCSQPVILHWLGPMFDPALAAYWGSADLATALETVARLIADNAAKVEGIKVSLLDA RWELELRRRLPPGVKMYTGDDFNYAELMAGDEAGHSHGLLGIFDPIAPVAAVALAQLAAGRPREFRQLLDPTVALSREIF RAPTRHYKAGVVFLAWLNGHQAHFSMAAGLSSARGPVHYAKLFELADACGVLSNPELALARMKQFLSVNCGIAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42227; Mature: 42227
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRLPQIDGSVKTYALKASPIAPAPAPAPAARPGPFNRSVYAAAHVVVDPWATVDPWDA CCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCC APVIDWDSTLAFREHLYRLGFKVAEAMDTAQRGMGLDWPVARELIQRSIGHARAVGGELA CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE CGVGTDQLAPGPQVSLAQVEAAYREQLGVVEAEGGRVILMASRALARAANGADDYHALYG ECCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEEECHHHHHHCCCCHHHHHHHH RILNDCSQPVILHWLGPMFDPALAAYWGSADLATALETVARLIADNAAKVEGIKVSLLDA HHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCEEEEEECC RWELELRRRLPPGVKMYTGDDFNYAELMAGDEAGHSHGLLGIFDPIAPVAAVALAQLAAG HHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RPREFRQLLDPTVALSREIFRAPTRHYKAGVVFLAWLNGHQAHFSMAAGLSSARGPVHYA CCHHHHHHHCHHHHHHHHHHHCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHH KLFELADACGVLSNPELALARMKQFLSVNCGIAG HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHIRLPQIDGSVKTYALKASPIAPAPAPAPAARPGPFNRSVYAAAHVVVDPWATVDPWDA CCEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCC APVIDWDSTLAFREHLYRLGFKVAEAMDTAQRGMGLDWPVARELIQRSIGHARAVGGELA CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEE CGVGTDQLAPGPQVSLAQVEAAYREQLGVVEAEGGRVILMASRALARAANGADDYHALYG ECCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEEECHHHHHHCCCCHHHHHHHH RILNDCSQPVILHWLGPMFDPALAAYWGSADLATALETVARLIADNAAKVEGIKVSLLDA HHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHCCCEEEEEECC RWELELRRRLPPGVKMYTGDDFNYAELMAGDEAGHSHGLLGIFDPIAPVAAVALAQLAAG HHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RPREFRQLLDPTVALSREIFRAPTRHYKAGVVFLAWLNGHQAHFSMAAGLSSARGPVHYA CCHHHHHHHCHHHHHHHHHHHCCHHHHCCCEEEEEEECCCHHHHHHHHCCCCCCCCHHHH KLFELADACGVLSNPELALARMKQFLSVNCGIAG HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA