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The map label for this gene is xcpQ [H]

Identifier: 121610459

GI number: 121610459

Start: 3898341

End: 3900563

Strand: Direct

Name: xcpQ [H]

Synonym: Veis_3529

Alternate gene names: 121610459

Gene position: 3898341-3900563 (Clockwise)

Preceding gene: 121610458

Following gene: 121610462

Centisome position: 70.03

GC content: 65.5

Gene sequence:

>2223_bases
ATGACTTGCCTGCTTTCGCCCCGCCTCCACTCAGCCATCAAAACGGTCGCTGTCAGTGCATTGTTTGCCTGCGCCAGCGG
CCAGATGTCGGCCCAAACGGCGATCGACACTGGCACCAGCAGCGTGCGCGCCGGGGAACCCGTCACGCTGAACTTTGCCA
ATGCCGACATCGAGGCCGTGGCACGCACCATGGCCACCATCACCGGCCGCAACGTGGTGGTCGACCCGCGCGTCAAGGGC
CAGCTCAACCTGGTCACCGAACGCGCCGTCACGCCCGCCGCCGCCTTCGAGCAGTTTCTGGCGGCGCTGCGGCTACAGGG
CTACACGCTGGTCGAGGCAGCGGGCCTGTACAAAGTGGTGCCCGAGGCCGACGCCAAACAACAAGGCGGCAGCGTCAGCG
TGGCGCAGGGCAGCACCGGCAGCACGCCCGGGGGCGGGCAGATCGTCACGCAGATCTTCAAACTCGACTTCGAGAACGCC
GCCAACCTGGTGCCGGTGCTGCGCCCGCTGATCAGCCCGAACAACACCATCAACGTCAACCCCGGCAACAACTCGCTGGT
GATCACCGACTACGCCGACAACCTGCAGCGCCTGGCGCGCATCGTGGCAGCGATGGATGTCTCCAATGCCACCGATGTGG
AAGTAATTGCGCTGGAAAACGCCATTGCCACCGACCTGGCACCGCTGATCGTGCGCCTGATCGATGGCGGCAACGCCGGC
ACACCGGCGGCCGCGCAGGGCCAGGCCGACAACTCGTTCAAGACCACGCTGATCGCCGAGCCGCGCAGCAACGCGCTGAT
TCTGCGCGCCGCCAACCCGGCCCGCGTGGCCTTGGTGCGCTCCCTGGTCGAGCGGCTCGATCGGGCCCCCGCGCCCGGCA
GCAGCGCGGCCAGCGGCAACATCCATGTGGTCTATCTGAAAAACGCCGACGCCACCAAACTGGCCGCCACCTTGCGCGCC
GCAATCAGTGGCAACGGCAGCGGCATGGCGTCATCAGGGCCGGGGCCGTCCGGCAGCACGACGGGCAGCGGCGGCGGGCT
GCTGTCAACGTCGACCGGTGGCAGCAGCCCGGGCCAGAGCCTGAACGCGGCCAGCAGCAATCAGCCCGCCACTGGCGGCC
AGATCCAGGCCGACCCGACGACCAACTCGCTGATCATCACGGCCCCCGACCCCCAATACCGCCAATTGCGCGCCGTCATC
GAGCAACTCGACGGGCGCCGCGCGCAGGTGCTGGTGGAAAGCCTGATCGTTGAAATTTCGGCCAACAAACTGGCGCAGTT
CGGCGTCCAGTGGCAAAGCCTGCTGGGCAAAAAGGGCGCCAGCCTCCTCGGCGCCATCGGCACCAACTCCGGCCAATCTG
GCGGCAACATCACGAGCCTGACCGCCGCACTGGCGTCCGGCAGCACCACCAGCATCGCCACCGCTGCCAATTCGCTCGGT
CAGGGCATGAACCTGCTGCTGGCGCCGCGCATCAACGGCCAGTATTACCTGGGCGCACTGGCCAACTTTTTGCAAAACAG
CGGCGATGCGAACGTGCTCTCCACGCCCAATCTGATGACACTGGACAACGAGGAAGCCAAAATCGTCATCGGCAACAACG
TGCCCTTCGTCACCGGCTCTTATGCCAACAGCAGCAGCAACAGCACGGTCAACCCGTTCACCACGGTGCAGCGCCAGGAT
GTCGGGCTGATGCTGCGCGTGCGCCCGCAAATCAATGAAAACGGCACCGTCAAGCTGTCGGTCTACCAGGAAGTCTCCAA
GATCGACGCCTCGACGCTGACCTCCCCGAATGGGCCAACCACCAGCAAACGCTCCATCGAATCGAATGTGCTGGTGGAAG
ACGGCAGCATCATCGTGATCGGCGGACTGCTGGAAGACAGTTACTCACTCAATCAGGACAAGGTGCCGGTGCTGGGCGAC
ATGCCGGTCCTCGGCAACCTGTTCCGCAGCGAAAAGCGCACCAGAAACAAAACCAACCTGATGATCTTCCTGCGCCCCAC
CGTGTTGCGCAGCAGCGCGAGCTCCGACATCCTGACCGCCGACAGATACGACGCCATCCGCGCGCTGCAACTGGGCATCC
AACCCGTCGCCCATCCGATGCTCGATGCCGTCGATGCCGCCCCGGTGCTACCCCCGCCGCGGCCTGGCACCGGGCACGAT
GATTCACCGGCCGCGCCGGAAGCAATCCGGCCGGTCGACACCGCCCCGGTCACTCAGTTTTGA

Upstream 100 bases:

>100_bases
GCCAGTGCCAGCCCCGAACGCGCAGCGGCGCTGTCCAACCTCTTGAACATCATCGGACGGCGCAGCGGCGCACGCTCCAT
CATCACCGTGGGTTGAACCT

Downstream 100 bases:

>100_bases
TGCCCAGTTCCGCGATGATTTTTCCATAGCGCCGGGCATCGGCGCGCAGCAGGGCGGCAAACTCCTGCGGGGTTTTTTGA
ACCACCTCGACGCCGATCGA

Product: general secretion pathway protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 740; Mature: 739

Protein sequence:

>740_residues
MTCLLSPRLHSAIKTVAVSALFACASGQMSAQTAIDTGTSSVRAGEPVTLNFANADIEAVARTMATITGRNVVVDPRVKG
QLNLVTERAVTPAAAFEQFLAALRLQGYTLVEAAGLYKVVPEADAKQQGGSVSVAQGSTGSTPGGGQIVTQIFKLDFENA
ANLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRLARIVAAMDVSNATDVEVIALENAIATDLAPLIVRLIDGGNAG
TPAAAQGQADNSFKTTLIAEPRSNALILRAANPARVALVRSLVERLDRAPAPGSSAASGNIHVVYLKNADATKLAATLRA
AISGNGSGMASSGPGPSGSTTGSGGGLLSTSTGGSSPGQSLNAASSNQPATGGQIQADPTTNSLIITAPDPQYRQLRAVI
EQLDGRRAQVLVESLIVEISANKLAQFGVQWQSLLGKKGASLLGAIGTNSGQSGGNITSLTAALASGSTTSIATAANSLG
QGMNLLLAPRINGQYYLGALANFLQNSGDANVLSTPNLMTLDNEEAKIVIGNNVPFVTGSYANSSSNSTVNPFTTVQRQD
VGLMLRVRPQINENGTVKLSVYQEVSKIDASTLTSPNGPTTSKRSIESNVLVEDGSIIVIGGLLEDSYSLNQDKVPVLGD
MPVLGNLFRSEKRTRNKTNLMIFLRPTVLRSSASSDILTADRYDAIRALQLGIQPVAHPMLDAVDAAPVLPPPRPGTGHD
DSPAAPEAIRPVDTAPVTQF

Sequences:

>Translated_740_residues
MTCLLSPRLHSAIKTVAVSALFACASGQMSAQTAIDTGTSSVRAGEPVTLNFANADIEAVARTMATITGRNVVVDPRVKG
QLNLVTERAVTPAAAFEQFLAALRLQGYTLVEAAGLYKVVPEADAKQQGGSVSVAQGSTGSTPGGGQIVTQIFKLDFENA
ANLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRLARIVAAMDVSNATDVEVIALENAIATDLAPLIVRLIDGGNAG
TPAAAQGQADNSFKTTLIAEPRSNALILRAANPARVALVRSLVERLDRAPAPGSSAASGNIHVVYLKNADATKLAATLRA
AISGNGSGMASSGPGPSGSTTGSGGGLLSTSTGGSSPGQSLNAASSNQPATGGQIQADPTTNSLIITAPDPQYRQLRAVI
EQLDGRRAQVLVESLIVEISANKLAQFGVQWQSLLGKKGASLLGAIGTNSGQSGGNITSLTAALASGSTTSIATAANSLG
QGMNLLLAPRINGQYYLGALANFLQNSGDANVLSTPNLMTLDNEEAKIVIGNNVPFVTGSYANSSSNSTVNPFTTVQRQD
VGLMLRVRPQINENGTVKLSVYQEVSKIDASTLTSPNGPTTSKRSIESNVLVEDGSIIVIGGLLEDSYSLNQDKVPVLGD
MPVLGNLFRSEKRTRNKTNLMIFLRPTVLRSSASSDILTADRYDAIRALQLGIQPVAHPMLDAVDAAPVLPPPRPGTGHD
DSPAAPEAIRPVDTAPVTQF
>Mature_739_residues
TCLLSPRLHSAIKTVAVSALFACASGQMSAQTAIDTGTSSVRAGEPVTLNFANADIEAVARTMATITGRNVVVDPRVKGQ
LNLVTERAVTPAAAFEQFLAALRLQGYTLVEAAGLYKVVPEADAKQQGGSVSVAQGSTGSTPGGGQIVTQIFKLDFENAA
NLVPVLRPLISPNNTINVNPGNNSLVITDYADNLQRLARIVAAMDVSNATDVEVIALENAIATDLAPLIVRLIDGGNAGT
PAAAQGQADNSFKTTLIAEPRSNALILRAANPARVALVRSLVERLDRAPAPGSSAASGNIHVVYLKNADATKLAATLRAA
ISGNGSGMASSGPGPSGSTTGSGGGLLSTSTGGSSPGQSLNAASSNQPATGGQIQADPTTNSLIITAPDPQYRQLRAVIE
QLDGRRAQVLVESLIVEISANKLAQFGVQWQSLLGKKGASLLGAIGTNSGQSGGNITSLTAALASGSTTSIATAANSLGQ
GMNLLLAPRINGQYYLGALANFLQNSGDANVLSTPNLMTLDNEEAKIVIGNNVPFVTGSYANSSSNSTVNPFTTVQRQDV
GLMLRVRPQINENGTVKLSVYQEVSKIDASTLTSPNGPTTSKRSIESNVLVEDGSIIVIGGLLEDSYSLNQDKVPVLGDM
PVLGNLFRSEKRTRNKTNLMIFLRPTVLRSSASSDILTADRYDAIRALQLGIQPVAHPMLDAVDAAPVLPPPRPGTGHDD
SPAAPEAIRPVDTAPVTQF

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=647, Percent_Identity=32.4574961360124, Blast_Score=259, Evalue=6e-70,
Organism=Escherichia coli, GI1789793, Length=303, Percent_Identity=26.4026402640264, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 76453; Mature: 76322

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCLLSPRLHSAIKTVAVSALFACASGQMSAQTAIDTGTSSVRAGEPVTLNFANADIEAV
CCEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHH
ARTMATITGRNVVVDPRVKGQLNLVTERAVTPAAAFEQFLAALRLQGYTLVEAAGLYKVV
HHHHHHHCCCEEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEC
PEADAKQQGGSVSVAQGSTGSTPGGGQIVTQIFKLDFENAANLVPVLRPLISPNNTINVN
CCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCEEEEC
PGNNSLVITDYADNLQRLARIVAAMDVSNATDVEVIALENAIATDLAPLIVRLIDGGNAG
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
TPAAAQGQADNSFKTTLIAEPRSNALILRAANPARVALVRSLVERLDRAPAPGSSAASGN
CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
IHVVYLKNADATKLAATLRAAISGNGSGMASSGPGPSGSTTGSGGGLLSTSTGGSSPGQS
EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
LNAASSNQPATGGQIQADPTTNSLIITAPDPQYRQLRAVIEQLDGRRAQVLVESLIVEIS
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ANKLAQFGVQWQSLLGKKGASLLGAIGTNSGQSGGNITSLTAALASGSTTSIATAANSLG
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHC
QGMNLLLAPRINGQYYLGALANFLQNSGDANVLSTPNLMTLDNEEAKIVIGNNVPFVTGS
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCEEEECCCCCEEEECCCCCEEEEC
YANSSSNSTVNPFTTVQRQDVGLMLRVRPQINENGTVKLSVYQEVSKIDASTLTSPNGPT
CCCCCCCCCCCCHHEEEECCCCEEEEEECCCCCCCCEEEEEHHHHHHCCHHHCCCCCCCC
TSKRSIESNVLVEDGSIIVIGGLLEDSYSLNQDKVPVLGDMPVLGNLFRSEKRTRNKTNL
CCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCE
MIFLRPTVLRSSASSDILTADRYDAIRALQLGIQPVAHPMLDAVDAAPVLPPPRPGTGHD
EEEEECHHHHCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
DSPAAPEAIRPVDTAPVTQF
CCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
TCLLSPRLHSAIKTVAVSALFACASGQMSAQTAIDTGTSSVRAGEPVTLNFANADIEAV
CEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHHHH
ARTMATITGRNVVVDPRVKGQLNLVTERAVTPAAAFEQFLAALRLQGYTLVEAAGLYKVV
HHHHHHHCCCEEEECCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEC
PEADAKQQGGSVSVAQGSTGSTPGGGQIVTQIFKLDFENAANLVPVLRPLISPNNTINVN
CCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHCCCCCEEEEC
PGNNSLVITDYADNLQRLARIVAAMDVSNATDVEVIALENAIATDLAPLIVRLIDGGNAG
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
TPAAAQGQADNSFKTTLIAEPRSNALILRAANPARVALVRSLVERLDRAPAPGSSAASGN
CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
IHVVYLKNADATKLAATLRAAISGNGSGMASSGPGPSGSTTGSGGGLLSTSTGGSSPGQS
EEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
LNAASSNQPATGGQIQADPTTNSLIITAPDPQYRQLRAVIEQLDGRRAQVLVESLIVEIS
CCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ANKLAQFGVQWQSLLGKKGASLLGAIGTNSGQSGGNITSLTAALASGSTTSIATAANSLG
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHC
QGMNLLLAPRINGQYYLGALANFLQNSGDANVLSTPNLMTLDNEEAKIVIGNNVPFVTGS
CCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEECCCCEEEECCCCCEEEECCCCCEEEEC
YANSSSNSTVNPFTTVQRQDVGLMLRVRPQINENGTVKLSVYQEVSKIDASTLTSPNGPT
CCCCCCCCCCCCHHEEEECCCCEEEEEECCCCCCCCEEEEEHHHHHHCCHHHCCCCCCCC
TSKRSIESNVLVEDGSIIVIGGLLEDSYSLNQDKVPVLGDMPVLGNLFRSEKRTRNKTNL
CCCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCE
MIFLRPTVLRSSASSDILTADRYDAIRALQLGIQPVAHPMLDAVDAAPVLPPPRPGTGHD
EEEEECHHHHCCCCCCCEECHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
DSPAAPEAIRPVDTAPVTQF
CCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934833; 10984043 [H]