| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610390
Identifier: 121610390
GI number: 121610390
Start: 3832517
End: 3832744
Strand: Direct
Name: 121610390
Synonym: Veis_3458
Alternate gene names: NA
Gene position: 3832517-3832744 (Clockwise)
Preceding gene: 121610389
Following gene: 121610391
Centisome position: 68.85
GC content: 60.53
Gene sequence:
>228_bases ATGAACGTTTCAACAAGATGGCCATGGGCTTTTGGCGCAGCAACCGCAGTGGGCTCCATTGGCCCATTGGCTCTACCCGG TTACCCGGTGCGGTTTCTTTTGCCCGGCATCGCGCTCTTTGGCACGATCATCGCCGCTTCTGCGGTGCAGAGCGTGTGGA TCGGCTTGCACGACCGGGACGGCATCGGCGCAAAGACCTGGGTCGGTTCGGATGACTACCGGGAATGA
Upstream 100 bases:
>100_bases CGGGTCGAGATCAGTGGCCATCTGGTGACGGCCACATTCAAGCCGGGTTCATGGAATGTGATCGTGACCACGAACGGCAA GCCATCCTGATTCACGAACC
Downstream 100 bases:
>100_bases CTCGACGACCCGCAGTGCTGCCGGTCGTTGACGAACAATGTCATCCGGGTGCTGGTGTCCATGCGCGCGCCTGCCATGGG TCTGGCGCTCGCGCTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MNVSTRWPWAFGAATAVGSIGPLALPGYPVRFLLPGIALFGTIIAASAVQSVWIGLHDRDGIGAKTWVGSDDYRE
Sequences:
>Translated_75_residues MNVSTRWPWAFGAATAVGSIGPLALPGYPVRFLLPGIALFGTIIAASAVQSVWIGLHDRDGIGAKTWVGSDDYRE >Mature_75_residues MNVSTRWPWAFGAATAVGSIGPLALPGYPVRFLLPGIALFGTIIAASAVQSVWIGLHDRDGIGAKTWVGSDDYRE
Specific function: Unknown
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7943; Mature: 7943
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSTRWPWAFGAATAVGSIGPLALPGYPVRFLLPGIALFGTIIAASAVQSVWIGLHDRD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GIGAKTWVGSDDYRE CCCCCCCCCCCCCCC >Mature Secondary Structure MNVSTRWPWAFGAATAVGSIGPLALPGYPVRFLLPGIALFGTIIAASAVQSVWIGLHDRD CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GIGAKTWVGSDDYRE CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA