| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610391
Identifier: 121610391
GI number: 121610391
Start: 3832741
End: 3833265
Strand: Direct
Name: 121610391
Synonym: Veis_3459
Alternate gene names: NA
Gene position: 3832741-3833265 (Clockwise)
Preceding gene: 121610390
Following gene: 121610392
Centisome position: 68.85
GC content: 67.24
Gene sequence:
>525_bases ATGACTCGACGACCCGCAGTGCTGCCGGTCGTTGACGAACAATGTCATCCGGGTGCTGGTGTCCATGCGCGCGCCTGCCA TGGGTCTGGCGCTCGCGCTGGCCACCACGATGGCATTCCTTGCGGCTTCGTGCCCCCGCAGGACGATCTCTTGCGCCTGA CGGTTTTCTTCATCGCGCATGGGGGTCAATGGGGGTCAATGGGGGTCATCTGCAAGGATGCGTGGACTCAGGCAATCGAG GCGTTCGCTCGCGCAGGAGGAACGGTGATCGCCGGCGCCCGCACCGGCACACGCGATGCCAACCGCCACGTCATTCGGGA CACTGCGCCCGGCCGCGCGCTGCCCGCGCCATGTGGCGTGGAGGTGCAGGAGTTTGGCCTCATGCCTTCGTCGGCAGACG GGGCGGACATCGAAGGCGTTCCCGTCGGTGTCGAACGACGGACCGATCGCGTACATGGCACCGGTGCGCTCAGGCGCGCG GCGCATGGCTGCGCCGTCATCAAACCGGCCAGCGCGCACGCATGA
Upstream 100 bases:
>100_bases CGATCATCGCCGCTTCTGCGGTGCAGAGCGTGTGGATCGGCTTGCACGACCGGGACGGCATCGGCGCAAAGACCTGGGTC GGTTCGGATGACTACCGGGA
Downstream 100 bases:
>100_bases ATTCCGGCAGGATGGGCACGCCAATCTTTTCTTCGAGCCACCACCATGGGACTGCACCAATCTGACCTCGGGTACCGTTG CCCACCGGAACGCAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Galactosidase
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTRRPAVLPVVDEQCHPGAGVHARACHGSGARAGHHDGIPCGFVPPQDDLLRLTVFFIAHGGQWGSMGVICKDAWTQAIE AFARAGGTVIAGARTGTRDANRHVIRDTAPGRALPAPCGVEVQEFGLMPSSADGADIEGVPVGVERRTDRVHGTGALRRA AHGCAVIKPASAHA
Sequences:
>Translated_174_residues MTRRPAVLPVVDEQCHPGAGVHARACHGSGARAGHHDGIPCGFVPPQDDLLRLTVFFIAHGGQWGSMGVICKDAWTQAIE AFARAGGTVIAGARTGTRDANRHVIRDTAPGRALPAPCGVEVQEFGLMPSSADGADIEGVPVGVERRTDRVHGTGALRRA AHGCAVIKPASAHA >Mature_173_residues TRRPAVLPVVDEQCHPGAGVHARACHGSGARAGHHDGIPCGFVPPQDDLLRLTVFFIAHGGQWGSMGVICKDAWTQAIEA FARAGGTVIAGARTGTRDANRHVIRDTAPGRALPAPCGVEVQEFGLMPSSADGADIEGVPVGVERRTDRVHGTGALRRAA HGCAVIKPASAHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18029; Mature: 17897
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRPAVLPVVDEQCHPGAGVHARACHGSGARAGHHDGIPCGFVPPQDDLLRLTVFFIAH CCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEE GGQWGSMGVICKDAWTQAIEAFARAGGTVIAGARTGTRDANRHVIRDTAPGRALPAPCGV CCCCCCCCEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCC EVQEFGLMPSSADGADIEGVPVGVERRTDRVHGTGALRRAAHGCAVIKPASAHA CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure TRRPAVLPVVDEQCHPGAGVHARACHGSGARAGHHDGIPCGFVPPQDDLLRLTVFFIAH CCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEE GGQWGSMGVICKDAWTQAIEAFARAGGTVIAGARTGTRDANRHVIRDTAPGRALPAPCGV CCCCCCCCEEEHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCC EVQEFGLMPSSADGADIEGVPVGVERRTDRVHGTGALRRAAHGCAVIKPASAHA CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA