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The map label for this gene is aidB [H]

Identifier: 121609781

GI number: 121609781

Start: 3183140

End: 3184819

Strand: Direct

Name: aidB [H]

Synonym: Veis_2832

Alternate gene names: 121609781

Gene position: 3183140-3184819 (Clockwise)

Preceding gene: 121609780

Following gene: 121609782

Centisome position: 57.18

GC content: 69.52

Gene sequence:

>1680_bases
ATGAACCCATGCCCGGCCAGCACCCACCGCGTGTTCAACCAGAGCGCGCCCTGGGTCGACGTGAACCTGTTCACCACCAA
CCTGCCTTTGCAGGACGCTGTGCGCCTGCACTGCGCGGATTTGCCATTGACCTGGCTGAGTGCGCTGGGCGCTGAAATGG
GCTCGGCCCAGATGCAAGAGCATGCGCGTCTGGCCAACACCCACAAGCCGCAGTTGCACACGCACGACCGTTTTGGCCAG
CGCAGCGACATGGTGGAATTTCACCCGAGCTACCACGCGCTGATCGGCGCCGCGTTGCGCCACGGCCTGCACGCCACGGC
CTGGACCCGCACCGGGGCGGCGGCAACCCATGCGCACACCGAGCGCGCCGCAGGCTTCATGCTGTTCACCGAGACCGAGC
CCTCGGTGCTGTGCCCGGTGTCGATGAGCTACGCCGTGATACCCGCCTTGCGCGGCAATGCCGCCTTGTGGGCCGACTGG
CATACCGGCCTGGCCGGCACCCGGTACGACCCGCGCCTGGTGCCGTACACGCAAAAATCCGCGCTCACCATGGGCATGGG
CATGACCGAAAAGCAGGGCGGCTCGGACGTGCGCGCCAACACCACACAGGCGCTGGCCGATGGGGCCGACGCCTGGGGGC
CGCGCTACCGCCTGACGGGCCATAAGTGGTTTTTCTCGGCGCCCATGTGCGACGCGTTTCTGGTGCTGGCCCAGGCGCCG
GGCGGGCTGAGCTGCTTTTTCCTGCCGCGCGTGCTGCCCGCAGGCGAGGACGGGGCAGGGCGCATCAACACCCTGCGCAT
CCAGCGCCTGAAGGACAAACTGGGCAACCATGCCAACGCCAGCGCCGAGGTCGAGTTCATCGACGCCGTGGCCTGGCGCG
TCGGCGAGGAAGGGCGCGGCGTGGCGCAGATACTGGAGATGGGCATCATGACGCGGCTCGACTGCGCCCTGGGCACCAGC
GGCCTGATGCGCCAGGCGCTGGCGCTGGCGCTGAACCACGCGCGCCAGCGCATGGCCTTTGGCAAGAAACTGATCGATCA
GCCGCTGATGCGCAATGTGCTGGCCGACCTGGCGCTGGAGAGCGAAGCGGCCACGGCGCTGTCCATCCGGCTCGCCAGCG
CCTTTGACCGGCAAGAGCGCGACCCGCACGAAGCCATCATGGCCCGGCTGCTCACGCCCGTGGCCAAGTTCTGGGTCTGC
AAGCGCGGCAGCGTATTTGCCCAGGAGGCCATGGAATGCCTGGGCGGCAACGGCTATGTGGAAGAGGGCGGCGCGGGCAC
CATGGCCCGCATCTACCGCGAAATGCCGCTCAACTCCATCTGGGAAGGGGCGGGCAACATCATGGCGCTGGACCTGCTGC
GAGCGCTGCGCCGAGCCGACAGCGCCGCCGCCCTGGCCGACGAACTGGCCCCCGCACGCGGCGCCCACCCGGCGCTGGAC
CGCATGGCCAGCGCGCTGCCACTGCGCATCGAAGCCATGGGCAGCGAGGCCCAAGCCCGCCGCCTGGCGCAAGACATGGC
CCTGGCCGTGCAAGCGGCCCTGCTGTACCGCAGCGCCCCGGCCAGCGTGTTTGGCGCCTTCTGTGCATCCCGCCTGGGCG
GCGACTGGGGCTACGGCTTCGGCACGCTGGGCGCCGGGATCGACTTCGAGGGCCTGCTGGCGCGCGCCTTGCCCGTCTGA

Upstream 100 bases:

>100_bases
CTCGCGGCCAGCCCCCCGTACCCATTGACACGCAGGCCGGGCCCATGAAACAGCCCGTGCCGCGTGCCTGCCTGCCCTGC
AGGAGCCTCAGGAGTCCCCG

Downstream 100 bases:

>100_bases
GCCGGCAGGTGCATCGACCTGCCGTATGGCTGACCTGTAGCGAAAGGAATCGGAAATGATCGAAGACTTCAACGGCAAGA
CCGCCGTGCTGACCGGCGCA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MNPCPASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQEHARLANTHKPQLHTHDRFGQ
RSDMVEFHPSYHALIGAALRHGLHATAWTRTGAAATHAHTERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADW
HTGLAGTRYDPRLVPYTQKSALTMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAP
GGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRGVAQILEMGIMTRLDCALGTS
GLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALESEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVC
KRGSVFAQEAMECLGGNGYVEEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSAAALADELAPARGAHPALD
RMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYGFGTLGAGIDFEGLLARALPV

Sequences:

>Translated_559_residues
MNPCPASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQEHARLANTHKPQLHTHDRFGQ
RSDMVEFHPSYHALIGAALRHGLHATAWTRTGAAATHAHTERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADW
HTGLAGTRYDPRLVPYTQKSALTMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAP
GGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRGVAQILEMGIMTRLDCALGTS
GLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALESEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVC
KRGSVFAQEAMECLGGNGYVEEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSAAALADELAPARGAHPALD
RMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYGFGTLGAGIDFEGLLARALPV
>Mature_559_residues
MNPCPASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQEHARLANTHKPQLHTHDRFGQ
RSDMVEFHPSYHALIGAALRHGLHATAWTRTGAAATHAHTERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADW
HTGLAGTRYDPRLVPYTQKSALTMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAP
GGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRGVAQILEMGIMTRLDCALGTS
GLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALESEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVC
KRGSVFAQEAMECLGGNGYVEEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSAAALADELAPARGAHPALD
RMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYGFGTLGAGIDFEGLLARALPV

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=295, Percent_Identity=30.5084745762712, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI226958414, Length=301, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI226958412, Length=300, Percent_Identity=25.6666666666667, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI76496475, Length=300, Percent_Identity=25.3333333333333, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4557235, Length=300, Percent_Identity=25.3333333333333, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI7656849, Length=282, Percent_Identity=26.5957446808511, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87082384, Length=518, Percent_Identity=47.2972972972973, Blast_Score=429, Evalue=1e-121,
Organism=Caenorhabditis elegans, GI86563381, Length=429, Percent_Identity=31.002331002331, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI86563383, Length=429, Percent_Identity=31.002331002331, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17538396, Length=303, Percent_Identity=27.0627062706271, Blast_Score=86, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=328, Percent_Identity=25.609756097561, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17506239, Length=326, Percent_Identity=25.4601226993865, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71985184, Length=277, Percent_Identity=24.5487364620939, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281363737, Length=293, Percent_Identity=23.5494880546075, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21356377, Length=272, Percent_Identity=27.2058823529412, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24646207, Length=295, Percent_Identity=26.1016949152542, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355753, Length=274, Percent_Identity=26.2773722627737, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60272; Mature: 60272

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPCPASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQE
CCCCCCCHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH
HARLANTHKPQLHTHDRFGQRSDMVEFHPSYHALIGAALRHGLHATAWTRTGAAATHAHT
HHHHHCCCCCCCCCHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH
ERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADWHTGLAGTRYDPRLVPYTQKS
HHHCCEEEEECCCCCEECCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH
ALTMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAP
HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEECCCHHHHHHHHHCCC
GGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRG
CCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCH
VAQILEMGIMTRLDCALGTSGLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVCKRGSVFAQEAMECLGGNGYV
HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE
EEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSAAALADELAPARGAHPALD
CCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
RMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYGF
HHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH
GTLGAGIDFEGLLARALPV
HHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNPCPASTHRVFNQSAPWVDVNLFTTNLPLQDAVRLHCADLPLTWLSALGAEMGSAQMQE
CCCCCCCHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH
HARLANTHKPQLHTHDRFGQRSDMVEFHPSYHALIGAALRHGLHATAWTRTGAAATHAHT
HHHHHCCCCCCCCCHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHH
ERAAGFMLFTETEPSVLCPVSMSYAVIPALRGNAALWADWHTGLAGTRYDPRLVPYTQKS
HHHCCEEEEECCCCCEECCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCH
ALTMGMGMTEKQGGSDVRANTTQALADGADAWGPRYRLTGHKWFFSAPMCDAFLVLAQAP
HHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEECCCHHHHHHHHHCCC
GGLSCFFLPRVLPAGEDGAGRINTLRIQRLKDKLGNHANASAEVEFIDAVAWRVGEEGRG
CCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCH
VAQILEMGIMTRLDCALGTSGLMRQALALALNHARQRMAFGKKLIDQPLMRNVLADLALE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEAATALSIRLASAFDRQERDPHEAIMARLLTPVAKFWVCKRGSVFAQEAMECLGGNGYV
HCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEE
EEGGAGTMARIYREMPLNSIWEGAGNIMALDLLRALRRADSAAALADELAPARGAHPALD
CCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHH
RMASALPLRIEAMGSEAQARRLAQDMALAVQAALLYRSAPASVFGAFCASRLGGDWGYGF
HHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCH
GTLGAGIDFEGLLARALPV
HHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]