Click here to switch to the map view.

The map label for this gene is 121609773

Identifier: 121609773

GI number: 121609773

Start: 3172380

End: 3173045

Strand: Direct

Name: 121609773

Synonym: Veis_2824

Alternate gene names: NA

Gene position: 3172380-3173045 (Clockwise)

Preceding gene: 121609772

Following gene: 121609774

Centisome position: 56.99

GC content: 54.8

Gene sequence:

>666_bases
ATGCCCACCTGCAAACCGGGGCTGCGGCCCCTCCCTGCTTCTTCGAGACCGGCGAGACAACGTGGCTTGTCGCTGATCAT
CGTCATGCTGATACTGATCGTGGTGTCGATATTGGGCGTCGGCGGCATGCGGATTGCGATGATGGCAGAGCGCGGCACCC
GCAATGACAGGGACATGCAAATAGCCTGGCAAGCGGCAGAGGCTGGTCTGGTCGACGCGGAATTCGACATCACGGGCCAG
TCTGCCAACTCCACCAGTAACAGAAGTGCGGTCTTCAAGCACAACGAGGTCGACCTTGCCAAATTCATTGACAATTGCGG
CAGCGCAGACCAAAGCATTGGTTTGTGCACTTTGAAAGCCACTGGCAAACCGGTATGGTTGACGGTTGACTTTGAAGCCA
CGGACGGCAATGCCAAAACAGTGGAATTCGGCAAATACACAGGCCGTGCCTTTCCGACGGGACCGACAGGCATACGGCCA
GCCCAAAAGCCGCGTTATCTGATAGAAATCATTCCAGATCAGCATGGGACCAGATCATTCAGAACGACCAACCAAAACGA
GTTGACCGGCAGCGAAACCTTGTCTTATGTATACCGCGTCACCGCCATGGGTTTTGGTCCGAATAAAGAAGCACAAGCCG
TGCTCCAGATGATTTACCGCAATTGA

Upstream 100 bases:

>100_bases
AATGACCCGGGCAGCAGATACACCCCCCCGTTTGATGGCCGCCTGCGCCAGACCCTGACTTTCACCGTGCATCTGCGCAA
CGCCCAGGATGAAAACTGAC

Downstream 100 bases:

>100_bases
GAGGGATTCACATGCCTGCACCCACCTTCAGAGAAAACATGCCTGGCGGCCTTGGGTGCAAACTGCAAGTGCTGCGCCAG
CGACTGCCGCAGCACCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilX; PilX Type IV Pilus Assembly Protein; Type 4 Fimbrial Biogenesis Protein Pilx-Related Protein; Type-4 Fimbrial Biogenesis Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MPTCKPGLRPLPASSRPARQRGLSLIIVMLILIVVSILGVGGMRIAMMAERGTRNDRDMQIAWQAAEAGLVDAEFDITGQ
SANSTSNRSAVFKHNEVDLAKFIDNCGSADQSIGLCTLKATGKPVWLTVDFEATDGNAKTVEFGKYTGRAFPTGPTGIRP
AQKPRYLIEIIPDQHGTRSFRTTNQNELTGSETLSYVYRVTAMGFGPNKEAQAVLQMIYRN

Sequences:

>Translated_221_residues
MPTCKPGLRPLPASSRPARQRGLSLIIVMLILIVVSILGVGGMRIAMMAERGTRNDRDMQIAWQAAEAGLVDAEFDITGQ
SANSTSNRSAVFKHNEVDLAKFIDNCGSADQSIGLCTLKATGKPVWLTVDFEATDGNAKTVEFGKYTGRAFPTGPTGIRP
AQKPRYLIEIIPDQHGTRSFRTTNQNELTGSETLSYVYRVTAMGFGPNKEAQAVLQMIYRN
>Mature_220_residues
PTCKPGLRPLPASSRPARQRGLSLIIVMLILIVVSILGVGGMRIAMMAERGTRNDRDMQIAWQAAEAGLVDAEFDITGQS
ANSTSNRSAVFKHNEVDLAKFIDNCGSADQSIGLCTLKATGKPVWLTVDFEATDGNAKTVEFGKYTGRAFPTGPTGIRPA
QKPRYLIEIIPDQHGTRSFRTTNQNELTGSETLSYVYRVTAMGFGPNKEAQAVLQMIYRN

Specific function: Unknown

COG id: COG4726

COG function: function code NU; Tfp pilus assembly protein PilX

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24082; Mature: 23951

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTCKPGLRPLPASSRPARQRGLSLIIVMLILIVVSILGVGGMRIAMMAERGTRNDRDMQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE
IAWQAAEAGLVDAEFDITGQSANSTSNRSAVFKHNEVDLAKFIDNCGSADQSIGLCTLKA
EEEEECCCCCEECEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEE
TGKPVWLTVDFEATDGNAKTVEFGKYTGRAFPTGPTGIRPAQKPRYLIEIIPDQHGTRSF
CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
RTTNQNELTGSETLSYVYRVTAMGFGPNKEAQAVLQMIYRN
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PTCKPGLRPLPASSRPARQRGLSLIIVMLILIVVSILGVGGMRIAMMAERGTRNDRDMQ
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE
IAWQAAEAGLVDAEFDITGQSANSTSNRSAVFKHNEVDLAKFIDNCGSADQSIGLCTLKA
EEEEECCCCCEECEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEEEE
TGKPVWLTVDFEATDGNAKTVEFGKYTGRAFPTGPTGIRPAQKPRYLIEIIPDQHGTRSF
CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
RTTNQNELTGSETLSYVYRVTAMGFGPNKEAQAVLQMIYRN
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA