| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609725
Identifier: 121609725
GI number: 121609725
Start: 3126128
End: 3126502
Strand: Direct
Name: 121609725
Synonym: Veis_2776
Alternate gene names: NA
Gene position: 3126128-3126502 (Clockwise)
Preceding gene: 121609720
Following gene: 121609727
Centisome position: 56.16
GC content: 51.47
Gene sequence:
>375_bases ATGACTATCAATACCCGCATCTTCTTGCTCATCTGCTTGGGCGCATTCTGCGCGTCTTTTGTCGTGCAAACCGTATTCCA GAGCATTCTTGGCGGGTCTATGTCGGTGTGGGGAGGTAATGCGGGCTGGCAGCGTGAGATTGCGTTTTGGAATGTCGGCG TTGCGCTGATCGTCGTGCAGCTGTTAAGGCTCAACGATCAACGAGCGGCGCTCGTTGCAGTACAGGGTTTTACAGTGCTT TTCTTGCTGCTAGGCCTTAATCACACGCAGGCATTATTCACAAACCCCGGAGCGCAGTTTCATTGGCCGCCTATGGTGCT CAACTCAATAGGTTTCTTTTTCGGAGTGAGGCTTTTATACAAAAGGGGTGCTTAG
Upstream 100 bases:
>100_bases GCCAGCGAGCAGTTCGTCGACATCCTCACAGATGTGTTGAGCGTGCTAGACGCAAATCGGGTTTCAGATCAGAGTTAACT CATCAATTCAGCCATCCGTA
Downstream 100 bases:
>100_bases TTGTCCAGCACCCTACTTCCGAGCGGCTTGCGCCAAGAATACCCGTTTCGATACATCAACTGCTCGGGCCACTTGAAGGC TGGTGTCAGCCGCAGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTINTRIFLLICLGAFCASFVVQTVFQSILGGSMSVWGGNAGWQREIAFWNVGVALIVVQLLRLNDQRAALVAVQGFTVL FLLLGLNHTQALFTNPGAQFHWPPMVLNSIGFFFGVRLLYKRGA
Sequences:
>Translated_124_residues MTINTRIFLLICLGAFCASFVVQTVFQSILGGSMSVWGGNAGWQREIAFWNVGVALIVVQLLRLNDQRAALVAVQGFTVL FLLLGLNHTQALFTNPGAQFHWPPMVLNSIGFFFGVRLLYKRGA >Mature_123_residues TINTRIFLLICLGAFCASFVVQTVFQSILGGSMSVWGGNAGWQREIAFWNVGVALIVVQLLRLNDQRAALVAVQGFTVLF LLLGLNHTQALFTNPGAQFHWPPMVLNSIGFFFGVRLLYKRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13674; Mature: 13543
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINTRIFLLICLGAFCASFVVQTVFQSILGGSMSVWGGNAGWQREIAFWNVGVALIVVQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHH LLRLNDQRAALVAVQGFTVLFLLLGLNHTQALFTNPGAQFHWPPMVLNSIGFFFGVRLLY HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH KRGA HCCC >Mature Secondary Structure TINTRIFLLICLGAFCASFVVQTVFQSILGGSMSVWGGNAGWQREIAFWNVGVALIVVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHH LLRLNDQRAALVAVQGFTVLFLLLGLNHTQALFTNPGAQFHWPPMVLNSIGFFFGVRLLY HHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH KRGA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA