| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609720
Identifier: 121609720
GI number: 121609720
Start: 3120782
End: 3121108
Strand: Direct
Name: 121609720
Synonym: Veis_2769
Alternate gene names: NA
Gene position: 3120782-3121108 (Clockwise)
Preceding gene: 121609719
Following gene: 121609725
Centisome position: 56.06
GC content: 64.22
Gene sequence:
>327_bases ATGAGCACGCTCACCGGGACCCCGTGGGGCTTCTTGTCCGATCCAGTGGCTGGAGTTAACGTCACGGCTGTCTACTTGCA GTTACGTGCGCCTGACAGCACGGTGTCCACCGTCACGGACGCAATGCGCCACGTCCAGCAGTTGCCGCGGCCGATCACGC CTCGCATCGTCTCCGCGCCGGGACTTACCGTGCAACTCGAACTCTGCGCCAGGCCGCAGATCATCGCCGGTCGCTCACCA CACCGGCTCGACCAAGATGAGGAGGAATTGCGCGAAATCCTGCGTGTCCTGGCTGCCCATGGACTGCAAGTCACGCCGCC GGCGTAG
Upstream 100 bases:
>100_bases GCAAGGGCCATGGCGTCTACGCGGTGACCGACCCCTTCGTGCAGGATGCTTGGCGCGGGCGTAAGACATTCCCAGCACCG GCCGTCAAGGTGGAGTCGAC
Downstream 100 bases:
>100_bases CTGAGAGGTTCAGCCGGCGGTGCGACGGACAAGGCGCATGGCGTAGGTGCCCGCAACGATGCGGTCCACGTTGCTCGAAA AGGACTTCACCGCATCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSTLTGTPWGFLSDPVAGVNVTAVYLQLRAPDSTVSTVTDAMRHVQQLPRPITPRIVSAPGLTVQLELCARPQIIAGRSP HRLDQDEEELREILRVLAAHGLQVTPPA
Sequences:
>Translated_108_residues MSTLTGTPWGFLSDPVAGVNVTAVYLQLRAPDSTVSTVTDAMRHVQQLPRPITPRIVSAPGLTVQLELCARPQIIAGRSP HRLDQDEEELREILRVLAAHGLQVTPPA >Mature_107_residues STLTGTPWGFLSDPVAGVNVTAVYLQLRAPDSTVSTVTDAMRHVQQLPRPITPRIVSAPGLTVQLELCARPQIIAGRSPH RLDQDEEELREILRVLAAHGLQVTPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11712; Mature: 11580
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTGTPWGFLSDPVAGVNVTAVYLQLRAPDSTVSTVTDAMRHVQQLPRPITPRIVSAP CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECC GLTVQLELCARPQIIAGRSPHRLDQDEEELREILRVLAAHGLQVTPPA CCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure STLTGTPWGFLSDPVAGVNVTAVYLQLRAPDSTVSTVTDAMRHVQQLPRPITPRIVSAP CCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEECC GLTVQLELCARPQIIAGRSPHRLDQDEEELREILRVLAAHGLQVTPPA CCEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA