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The map label for this gene is rbgA [H]

Identifier: 121609710

GI number: 121609710

Start: 3106639

End: 3107628

Strand: Direct

Name: rbgA [H]

Synonym: Veis_2758

Alternate gene names: 121609710

Gene position: 3106639-3107628 (Clockwise)

Preceding gene: 121609709

Following gene: 121609711

Centisome position: 55.81

GC content: 68.38

Gene sequence:

>990_bases
ATGAAAGCACCCCCGCACATGGCCATACAGTGGTTCCCCGGTCACATGCATTTGACCCGAAAAGCCATCACCGAACGCAT
CGGGGACATCGATGCCGTGATCGAGGTGCTCGACGCGCGCCTGCCAGGCTCCAGCGCCAATCCGCTGCTGGCCGAGCTTA
CCGGCCGCAAACCCAGGCTCAAGGTGCTCAACAAGCAGGATCTGGCCGACCCCGAGCGCACCGCGCTGTGGCTGGCCTGG
TACCAGGCCCAGGACGGCACCAGCGCCGTGGCACTGGACGCATCCGGGCCTGCGCCCGTCCGCCAACTGATAGCCGACTG
CCACCGGCTGGCGCCCCACCGGGGCGGCATGGCCAAGCCCATGCGTGTGCTGATCTGCGGCGTGCCGAACGTGGGCAAGT
CGACGCTGATCAACCGCCTGAGCCACAAGCGCCAGGCCAAGACCGGCGACGAAGCCGGCGTCACCCGACAGGAGCAACGC
ATCACGCTGGCCGATGACTTCTACCTGTGGGACACGCCGGGCATGCTGTGGCCGCGCATCATCGTGCCCGAGAGCGGCGA
CCACTTGGCCGCCAGCGGCGCCATAGGCCGCAATGCCTACGACGAAGAACTGGTCGCGCTGCAACTGCTGCGCCGTCTGC
AACGGCACTATGCCCCGCTGCTGGAGGCACGCTACCGGCTCGGCCTGCCCGCAGACGCCCTGGCCAGCCTGCACGACGAA
GAACTGCTCCAGGCCATTGGCCGCAAACGCGGCGCCATGCAGGATGGCGGCCAAGTGAACCGGCAAAAGACCGCCGAGAT
CGTGCTGACCGATTTCCGCAGCGCCAGCCTGGGCCGCATCACACTGGAAACCCCGCGAGAATTCGACGCTTGGCGCGCCG
CCGCCCTGGCCCGGGACGCCGAGCGCCAGGCGAGCAAGGACGCGCGCCGCAAAGCCAGGAGCGCGGGCCAGGGTGCATAT
GCACCCGCATCGGCGCGCAAGCCAGGCTGA

Upstream 100 bases:

>100_bases
GCGTCGCTGCCGGCGGGCAGGCCGGTGGGTTTGCGCGACGACCCATTCGGCATGAGCGTTTGCCGATACGATGGTCGTGA
CATATCGATGGTCGTGACAC

Downstream 100 bases:

>100_bases
GCGCCTGCGCCTTGTTACCATCGCTTTCCACCCAAGAGGCATCCACCATGTGCGGCATCGTCGGCGCGGTCTCCACGCGC
AACATCGTTCCCATTCTCGT

Product: GTP-binding protein, HSR1-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKAPPHMAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRLKVLNKQDLADPERTALWLAW
YQAQDGTSAVALDASGPAPVRQLIADCHRLAPHRGGMAKPMRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQR
ITLADDFYLWDTPGMLWPRIIVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLGLPADALASLHDE
ELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETPREFDAWRAAALARDAERQASKDARRKARSAGQGAY
APASARKPG

Sequences:

>Translated_329_residues
MKAPPHMAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRLKVLNKQDLADPERTALWLAW
YQAQDGTSAVALDASGPAPVRQLIADCHRLAPHRGGMAKPMRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQR
ITLADDFYLWDTPGMLWPRIIVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLGLPADALASLHDE
ELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETPREFDAWRAAALARDAERQASKDARRKARSAGQGAY
APASARKPG
>Mature_329_residues
MKAPPHMAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRLKVLNKQDLADPERTALWLAW
YQAQDGTSAVALDASGPAPVRQLIADCHRLAPHRGGMAKPMRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQR
ITLADDFYLWDTPGMLWPRIIVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLGLPADALASLHDE
ELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETPREFDAWRAAALARDAERQASKDARRKARSAGQGAY
APASARKPG

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=297, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI7019419, Length=265, Percent_Identity=28.6792452830189, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211047, Length=186, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI25143545, Length=275, Percent_Identity=25.8181818181818, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115535155, Length=275, Percent_Identity=25.8181818181818, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32563985, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71990926, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32563983, Length=224, Percent_Identity=28.125, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324381, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323744, Length=237, Percent_Identity=28.6919831223629, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320842, Length=277, Percent_Identity=27.4368231046931, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI85815858, Length=321, Percent_Identity=29.9065420560748, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19922460, Length=253, Percent_Identity=28.8537549407115, Blast_Score=71, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 36157; Mature: 36157

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPPHMAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRL
CCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHH
KVLNKQDLADPERTALWLAWYQAQDGTSAVALDASGPAPVRQLIADCHRLAPHRGGMAKP
EECCCCCCCCHHHHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
MRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQRITLADDFYLWDTPGMLWPRI
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEECCEEEECCCCCCCCEE
IVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLGLPADALASLHDE
EECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH
ELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETPREFDAWRAAALARDA
HHHHHHHHHCCCCCCCCCCCHHHHHHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHH
ERQASKDARRKARSAGQGAYAPASARKPG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAPPHMAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRL
CCCCCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHH
KVLNKQDLADPERTALWLAWYQAQDGTSAVALDASGPAPVRQLIADCHRLAPHRGGMAKP
EECCCCCCCCHHHHEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
MRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQRITLADDFYLWDTPGMLWPRI
EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCEEEEECCEEEECCCCCCCCEE
IVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLGLPADALASLHDE
EECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHH
ELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETPREFDAWRAAALARDA
HHHHHHHHHCCCCCCCCCCCHHHHHHHEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHH
ERQASKDARRKARSAGQGAYAPASARKPG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]