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The map label for this gene is rcnA [H]

Identifier: 121609709

GI number: 121609709

Start: 3105737

End: 3106498

Strand: Direct

Name: rcnA [H]

Synonym: Veis_2757

Alternate gene names: 121609709

Gene position: 3105737-3106498 (Clockwise)

Preceding gene: 121609708

Following gene: 121609710

Centisome position: 55.79

GC content: 61.29

Gene sequence:

>762_bases
ATGACGGATTTACTGCAACAGGGCGTTGGCAGCGCCTGGCTTTTCATTCCCGGCGCCATTTCGTTGGGCGCTTTGCATGG
GCTTGAGCCGGGGCATTCCAAGGCGGTGATGGCCGCTTTCATCGTTGCCATTCGCGGCACCGTGGGCCAGGCCATCATGC
TTGGCTTGGCGGCCATGGTCTCGCATACCGCCGTGGTGTGGCTGCTTGCCTTCCTTGGCATGCGCAGCCAGTGGAATGCC
GAATCCTCCGAGCCGTACTTTCAATTGGCATCCGGCATGTCGATCGTCGCCATTGCCGTCTGGATGGCGTGGCGAACCTG
GCGTGGGTCGCATCACCATGGTCATGCCGCCCTGCCTGAAGGCGCTGCATCCGCTGGCCAGGACCCGCATGAGCTGGCAC
ATGCCAACGAGATCCGGCAGCGCTTTGGTGACGGCAAGGCAAGCAATCGCCAAATCATGCTCTTTGGCATCACCAGTGGA
TTGATTCCCTGCCCGGCAGCGATCACCGTATTGCTGCTGTGCCTGCAACTCAAGCAAGTCGCGCTGGGGGCCACGCTGGT
GCTGTGCTTCAGCATCGGTCTGGCGCTGACGATGGTGTTGTCTGGCGTTGTCGCTGCCATCAGCGTGCGCCATGTTTCCA
GGCGCTGGTCAGGTTTTGGCGAGTTTGCGCGCAGGGTGCCTTATGTCTCAAGCGCCCTGATCGTGTCGTTGGGGCTGTAC
GTCAGCTATTGCGGCTGGATGGCGCTATCGGGTGTGGCATGA

Upstream 100 bases:

>100_bases
AGCATTGTCTTGAACACGCCATCGGCGACAACCCCAGGGACTCTGGTCGAGCCATCCGCGAATTCAAGGAAATCACCAAG
TATTTATAAGGGGTCCCGGC

Downstream 100 bases:

>100_bases
GAGAAAATTCACCAGCAGCCATGCTTGGCGCCTGGCACCAGCGTCGCTGCCGGCGGGCAGGCCGGTGGGTTTGCGCGACG
ACCCATTCGGCATGAGCGTT

Product: nickel/cobalt efflux protein RcnA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTDLLQQGVGSAWLFIPGAISLGALHGLEPGHSKAVMAAFIVAIRGTVGQAIMLGLAAMVSHTAVVWLLAFLGMRSQWNA
ESSEPYFQLASGMSIVAIAVWMAWRTWRGSHHHGHAALPEGAASAGQDPHELAHANEIRQRFGDGKASNRQIMLFGITSG
LIPCPAAITVLLLCLQLKQVALGATLVLCFSIGLALTMVLSGVVAAISVRHVSRRWSGFGEFARRVPYVSSALIVSLGLY
VSYCGWMALSGVA

Sequences:

>Translated_253_residues
MTDLLQQGVGSAWLFIPGAISLGALHGLEPGHSKAVMAAFIVAIRGTVGQAIMLGLAAMVSHTAVVWLLAFLGMRSQWNA
ESSEPYFQLASGMSIVAIAVWMAWRTWRGSHHHGHAALPEGAASAGQDPHELAHANEIRQRFGDGKASNRQIMLFGITSG
LIPCPAAITVLLLCLQLKQVALGATLVLCFSIGLALTMVLSGVVAAISVRHVSRRWSGFGEFARRVPYVSSALIVSLGLY
VSYCGWMALSGVA
>Mature_252_residues
TDLLQQGVGSAWLFIPGAISLGALHGLEPGHSKAVMAAFIVAIRGTVGQAIMLGLAAMVSHTAVVWLLAFLGMRSQWNAE
SSEPYFQLASGMSIVAIAVWMAWRTWRGSHHHGHAALPEGAASAGQDPHELAHANEIRQRFGDGKASNRQIMLFGITSGL
IPCPAAITVLLLCLQLKQVALGATLVLCFSIGLALTMVLSGVVAAISVRHVSRRWSGFGEFARRVPYVSSALIVSLGLYV
SYCGWMALSGVA

Specific function: Efflux system for nickel and cobalt [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family. RcnA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788423, Length=271, Percent_Identity=54.6125461254613, Blast_Score=273, Evalue=8e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 26787; Mature: 26656

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLLQQGVGSAWLFIPGAISLGALHGLEPGHSKAVMAAFIVAIRGTVGQAIMLGLAAMV
CCHHHHHCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHTAVVWLLAFLGMRSQWNAESSEPYFQLASGMSIVAIAVWMAWRTWRGSHHHGHAALPE
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAASAGQDPHELAHANEIRQRFGDGKASNRQIMLFGITSGLIPCPAAITVLLLCLQLKQV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
ALGATLVLCFSIGLALTMVLSGVVAAISVRHVSRRWSGFGEFARRVPYVSSALIVSLGLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VSYCGWMALSGVA
HHHHHHHHHCCCC
>Mature Secondary Structure 
TDLLQQGVGSAWLFIPGAISLGALHGLEPGHSKAVMAAFIVAIRGTVGQAIMLGLAAMV
CHHHHHCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SHTAVVWLLAFLGMRSQWNAESSEPYFQLASGMSIVAIAVWMAWRTWRGSHHHGHAALPE
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAASAGQDPHELAHANEIRQRFGDGKASNRQIMLFGITSGLIPCPAAITVLLLCLQLKQV
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
ALGATLVLCFSIGLALTMVLSGVVAAISVRHVSRRWSGFGEFARRVPYVSSALIVSLGLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VSYCGWMALSGVA
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA