| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is erpA [H]
Identifier: 121609596
GI number: 121609596
Start: 2985006
End: 2985371
Strand: Direct
Name: erpA [H]
Synonym: Veis_2642
Alternate gene names: 121609596
Gene position: 2985006-2985371 (Clockwise)
Preceding gene: 121609595
Following gene: 121609599
Centisome position: 53.62
GC content: 59.84
Gene sequence:
>366_bases ATGAGCGCCGTTGCCGAAAACATCCAGACCGGAATGCCCGCACCCATCCTGTTCACCGACAGCGCAGCGGCCAAGGTGGC GCAGCTGATTGCCGAGGAGGGCAACCCTGAGCTCAAACTGCGCGTGTTCGTGCAAGGCGGCGGCTGCTCGGGCTTTCAGT ACGGTTTCACCTTCGATGAAATCACCAACGAAGACGACACCACGATGACCAAGAACGGTGTCTCGCTGCTGATCGATGCG ATGAGCTACCAGTACCTGGTCGGCGCCGAGATCGACTACAAGGAAGACCTGCAGGGCGCGCAGTTCGTCATCAAGAACCC GAACGCGACCACCACCTGCGGCTGCGGTTCGAGCTTTTCTGCATGA
Upstream 100 bases:
>100_bases CAAAAGCCCCCACTGGAACTGGCGTCAAGCCGCCAGTGAGCGCAATTCCCGAGCAGTTTGCAGTAGTATTCCCGGCCATA CCCTGAACCCGGAGTACCCC
Downstream 100 bases:
>100_bases GCGCCGCACGGCCGCCCGAAGGCGCTCATACCGTAGCCGAAGGCGAAGGTACTCCAATGAGCGCCAGCGCCGGACCGGTT CAGCGCGGGTACACCGCGCC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSAVAENIQTGMPAPILFTDSAAAKVAQLIAEEGNPELKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSA
Sequences:
>Translated_121_residues MSAVAENIQTGMPAPILFTDSAAAKVAQLIAEEGNPELKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDA MSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSA >Mature_120_residues SAVAENIQTGMPAPILFTDSAAAKVAQLIAEEGNPELKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAM SYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSA
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=39.622641509434, Blast_Score=85, Evalue=2e-17, Organism=Homo sapiens, GI52426768, Length=121, Percent_Identity=33.0578512396694, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=64.1509433962264, Blast_Score=152, Evalue=6e-39, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=34.9056603773585, Blast_Score=69, Evalue=8e-14, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25146411, Length=107, Percent_Identity=31.7757009345794, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=37.5, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=82, Percent_Identity=48.780487804878, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=32.4074074074074, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12848; Mature: 12717
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVAENIQTGMPAPILFTDSAAAKVAQLIAEEGNPELKLRVFVQGGGCSGFQYGFTFDE CCCHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCEEECCCCCCC A C >Mature Secondary Structure SAVAENIQTGMPAPILFTDSAAAKVAQLIAEEGNPELKLRVFVQGGGCSGFQYGFTFDE CCHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHH ITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFS HCCCCCCEEECCCCEEEEECCCCEEEECCCCCCHHCCCCCEEEEECCCCCEEECCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA