| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609595
Identifier: 121609595
GI number: 121609595
Start: 2984540
End: 2984944
Strand: Direct
Name: 121609595
Synonym: Veis_2641
Alternate gene names: NA
Gene position: 2984540-2984944 (Clockwise)
Preceding gene: 121609594
Following gene: 121609596
Centisome position: 53.61
GC content: 60.74
Gene sequence:
>405_bases TTGCCGATGTTTTCCCGTAAAAAGCAGCCGCCGATCAAAAGCCTGATCGCTCAGGGCATGAGGATCGAAGGCGATGTGCA TTTCGTCGAAGGCTTGCGCATCGATGGCGTGGTGGCCGGGAATATCCGGGCAGGCGCGGAGCAGCCCAGCATTTTGGTGA TCTCCGAAACCGCCCGTGTCGAAGGCATGGTGCATGCCGACCATGTGATCGTCAATGGCCAGGTGATCGGCACCGTGCAT GCGGCCGAGTTGCTGGAACTGCAACCCAAGGCGCAGATCGAGGGCGACGTGCATTACAAGGCGTTGGAGATGCACCAGGG CGGCACGATTGCCGGGCAGTTGTTCCCGACATCGGTGCTGGCCGAGCAAAAGCCCCCACTGGAACTGGCGTCAAGCCGCC AGTGA
Upstream 100 bases:
>100_bases GCGCGCGTGCTCGACGGAGCCACCGTGCGCACCACGCAAACCATGCCGGTCGACCCTGCGCTGCGTTGACATGCCGTGGT GGCCTGCCTTTCCAGGAGTC
Downstream 100 bases:
>100_bases GCGCAATTCCCGAGCAGTTTGCAGTAGTATTCCCGGCCATACCCTGAACCCGGAGTACCCCATGAGCGCCGTTGCCGAAA ACATCCAGACCGGAATGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPMFSRKKQPPIKSLIAQGMRIEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARVEGMVHADHVIVNGQVIGTVH AAELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVLAEQKPPLELASSRQ
Sequences:
>Translated_134_residues MPMFSRKKQPPIKSLIAQGMRIEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARVEGMVHADHVIVNGQVIGTVH AAELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVLAEQKPPLELASSRQ >Mature_133_residues PMFSRKKQPPIKSLIAQGMRIEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARVEGMVHADHVIVNGQVIGTVHA AELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVLAEQKPPLELASSRQ
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14433; Mature: 14302
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMFSRKKQPPIKSLIAQGMRIEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARV CCCCCCCCCCCHHHHHHCCCEECCCEEEECCEEECCEEECCEECCCCCCCEEEEECCCCC EGMVHADHVIVNGQVIGTVHAAELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVL CEEEECCEEEECCEEEEEEHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHH AEQKPPLELASSRQ CCCCCCCCCCCCCC >Mature Secondary Structure PMFSRKKQPPIKSLIAQGMRIEGDVHFVEGLRIDGVVAGNIRAGAEQPSILVISETARV CCCCCCCCCCHHHHHHCCCEECCCEEEECCEEECCEEECCEECCCCCCCEEEEECCCCC EGMVHADHVIVNGQVIGTVHAAELLELQPKAQIEGDVHYKALEMHQGGTIAGQLFPTSVL CEEEECCEEEECCEEEEEEHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHH AEQKPPLELASSRQ CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA