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The map label for this gene is yecS [H]

Identifier: 121609554

GI number: 121609554

Start: 2941151

End: 2941822

Strand: Direct

Name: yecS [H]

Synonym: Veis_2598

Alternate gene names: 121609554

Gene position: 2941151-2941822 (Clockwise)

Preceding gene: 121609553

Following gene: 121609555

Centisome position: 52.83

GC content: 65.33

Gene sequence:

>672_bases
ATGGACTACACCTTCCAGTTCGGTTCGGTGTGGGCTGCGCTGCCCCGACTCGCGCAGGGCGCGCAATTGACGGTGCTGCT
ATCGCTCGCCGCCATCGCGATCGGGCTGGCCATCGGCGTGCTGTGCGCGCTCGCGCGGACCTCGCGCCGCGCCTGGCTGC
GCTGGCCCGCTGCGGTCTACGTCGAGTCGATCCGCAACACGCCTTTCCTGATTCAGCTGTTTCTCATCTACTTCGGGCTT
GCGTCGCTGGGCCTGCGGCTCGATCCGATCGATGCGGCGCTCGTCGGCATGTCCATCAACTGCGGCGCGTATGCAACCGA
GATCGTGCGCGCAGGCATCGACGCCATTGCGGGCGGCCAACTCGAGGCGGCGCATGCGCTGGGCTTTCCCGTGCCCGCCA
TCGTGCGCCATGTGATTGTTTTTCCTGCGCTGCGCGCGGTCTTCCCCGCCCTGGCAAGCCAGTTCCTCCTGGTGATGCTC
GGCTCGGCGGTCGTGTCGACGATTTCGGTCGAGGAGCTCACGGGCGTGGCGCATCTCATCGAAACCGAAAACTTTCGCCC
CTTCGAGGTCTACATCGTCGTGACGGGCATCTACCTGGCCATCGCGTTTTCGCTCAAACTGGTGTTCGCCGCCGTCGAGC
GCTTTTACTTTCAGTCGCGGGGGCGCGCATGA

Upstream 100 bases:

>100_bases
CCGGCACGCCCTGGAGCGCCTGCCGCGCGTTTGCGCACGGCATCGAACTGGCGGACGCCAGCGCCGATTTCTACGCCCGC
TATCCGGCCGCCTGAGCGCG

Downstream 100 bases:

>100_bases
TCCGCGACTTCGGCAGCGTCGAATTCCTCTACCTGCTGGCCGCGATGCGCTGGACGCTCGGCCTGTCGGTGCTGGCCTTC
GTCTGTGGCGGCATCGTGGG

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVYVESIRNTPFLIQLFLIYFGL
ASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIAGGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVML
GSAVVSTISVEELTGVAHLIETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVERFYFQSRGRA

Sequences:

>Translated_223_residues
MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVYVESIRNTPFLIQLFLIYFGL
ASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIAGGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVML
GSAVVSTISVEELTGVAHLIETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVERFYFQSRGRA
>Mature_223_residues
MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVYVESIRNTPFLIQLFLIYFGL
ASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIAGGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVML
GSAVVSTISVEELTGVAHLIETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVERFYFQSRGRA

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=190, Percent_Identity=37.8947368421053, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=37.2641509433962, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=25.8373205741627, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1786873, Length=220, Percent_Identity=29.5454545454545, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787087, Length=221, Percent_Identity=27.1493212669683, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786874, Length=224, Percent_Identity=27.6785714285714, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788646, Length=217, Percent_Identity=27.6497695852535, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48994930, Length=133, Percent_Identity=33.0827067669173, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24028; Mature: 24028

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVY
CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
VESIRNTPFLIQLFLIYFGLASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIAGGQ
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
LEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVMLGSAVVSTISVEELTGVAHLI
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVERFYFQSRGRA
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVY
CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
VESIRNTPFLIQLFLIYFGLASLGLRLDPIDAALVGMSINCGAYATEIVRAGIDAIAGGQ
HHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
LEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVMLGSAVVSTISVEELTGVAHLI
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVERFYFQSRGRA
HCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]