| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is nasE [H]
Identifier: 121609550
GI number: 121609550
Start: 2936225
End: 2936647
Strand: Direct
Name: nasE [H]
Synonym: Veis_2594
Alternate gene names: 121609550
Gene position: 2936225-2936647 (Clockwise)
Preceding gene: 121609549
Following gene: 121609551
Centisome position: 52.75
GC content: 70.45
Gene sequence:
>423_bases ATGACCGAGCACATTCCCGATTGGCAAGCCATCTGCCGCATCGACGACATCCCGGTGCTGGGCGCGCGCCGCGTGGCCCG CCCCCGGGGGCTGGAGGTGGCGCTGTTCCGCAATGCCGACGGCGGCATTTTTGCGCTGCTCGACCGTTGCCCCCATCGGG GCGGCCCCCTGAGCCAGGGCATCGTGTTTGGCACCCGGGTGGCCTGCCCCCTGCACAACTGGACCATCGACCTGTGCGAC GGCCAGGCCCATGCGCCCGATCAGGGATGCACACCCCGGTTTGCCGTCAAGGTGGACAACGGCACGGTCTACCTCGACCG CCATGAACTGGCGACGCTGGCCACCGATCAGACCCGGCCGGGCGCCGGGCCGGCAAGGCCGGCACAGTCGGCACAGTCGG CCCAAAGGGCGAGCGCAGCCTGA
Upstream 100 bases:
>100_bases GATGAGCCCGACCCCTGGGTCGAGTTCGACAAGGCGGCGCTGGACACACGCCAGTTTGCCGCGCTGAACGCCTGAGCCGG CACCCGAAGGACCTTGGCCC
Downstream 100 bases:
>100_bases GCAGCGCCAGCGCGCCGGCCATGCAAGAAACCCGCTCCACCTGCCCCTACTGCGGCGTAGGCTGCGGCGTGATCATCGAC AGCGACGGGGCGCAAATCAC
Product: nitrite reductase (NAD(P)H) small subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTEHIPDWQAICRIDDIPVLGARRVARPRGLEVALFRNADGGIFALLDRCPHRGGPLSQGIVFGTRVACPLHNWTIDLCD GQAHAPDQGCTPRFAVKVDNGTVYLDRHELATLATDQTRPGAGPARPAQSAQSAQRASAA
Sequences:
>Translated_140_residues MTEHIPDWQAICRIDDIPVLGARRVARPRGLEVALFRNADGGIFALLDRCPHRGGPLSQGIVFGTRVACPLHNWTIDLCD GQAHAPDQGCTPRFAVKVDNGTVYLDRHELATLATDQTRPGAGPARPAQSAQSAQRASAA >Mature_139_residues TEHIPDWQAICRIDDIPVLGARRVARPRGLEVALFRNADGGIFALLDRCPHRGGPLSQGIVFGTRVACPLHNWTIDLCDG QAHAPDQGCTPRFAVKVDNGTVYLDRHELATLATDQTRPGAGPARPAQSAQSAQRASAA
Specific function: Required for nitrite assimilation. Required for activity of the reductase [H]
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012748 - InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.7.1.4 [H]
Molecular weight: Translated: 15029; Mature: 14898
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHIPDWQAICRIDDIPVLGARRVARPRGLEVALFRNADGGIFALLDRCPHRGGPLSQG CCCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHCCCCCCCCCCC IVFGTRVACPLHNWTIDLCDGQAHAPDQGCTPRFAVKVDNGTVYLDRHELATLATDQTRP EEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCC GAGPARPAQSAQSAQRASAA CCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TEHIPDWQAICRIDDIPVLGARRVARPRGLEVALFRNADGGIFALLDRCPHRGGPLSQG CCCCCCHHHHEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEHHCCCCCCCCCCC IVFGTRVACPLHNWTIDLCDGQAHAPDQGCTPRFAVKVDNGTVYLDRHELATLATDQTRP EEEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCC GAGPARPAQSAQSAQRASAA CCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]