| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is corA [H]
Identifier: 121609506
GI number: 121609506
Start: 2879942
End: 2880928
Strand: Direct
Name: corA [H]
Synonym: Veis_2550
Alternate gene names: 121609506
Gene position: 2879942-2880928 (Clockwise)
Preceding gene: 121609505
Following gene: 121609516
Centisome position: 51.73
GC content: 60.28
Gene sequence:
>987_bases ATGCTCAATATCTTCACGCTCGTCAATGGCCGGCTGTTCCAGGAAGAAATCGAATCCCTGGAAGAACTGACCCGCTTCCA GCCGATCTGGGTCGACCTGCAAGCCCCTACCGTTGAAGAAAAACGCTGGATCGAGCAGCACTACAACTTGTCGATCCCCG ACAACGCGATGGACGATGACATCGAGGAGTCCGCCCGCTTCTACGAAGAAGACAACGGCGAGATGCACATCCGCAGCGAC TTCCTGATCGACGACGATGCAGACCCGCGCTCGGTGCGGGTGGCCTTCATCCTGAACCAGCACAACGCCCAGTTGAAAAG CCAGGGCGTGTTGTTTTCGATCCACGACGAGGATGTGCCCGTGTTTCGCCTGCTGCGCATGCGCGCGCGCCGCGCACCCG GCCTGATCGAGGATGCCAAGGAGGTGCTGCTCAAGCTGTTCGATGCCGACGCCGAGTATTCGGCCGACACGCTGGAGAAC ATCTACGACGAGTTGGAAAAAGCCAGCCGGCAGGTGCTGGCCGGCGGCGTGACCGACGCCCTCGCCGGCGCAGTGCTGGC CGCCATTGCCCGCCAGGAAGACCTGAACGGTCGCATCCGGCGCAACGTGATGGACACCCGCCGCGCCGTCAGTTTCATGA TGCGCAGCAAGATGCTCAATGCCGGGCAGTTCGAGCAAGCGCGACAAATCCTGCGTGACATCGAGTCGCTGGACAACCAC ACGGCCTTCCTGTTCGAGAAGATCAACTTCCTGATGGCCGCCACGGTCGGTTTCATCAACATCAACCAGAACAAGATCAT CAAGATCTTCTCGGTAGCCAGCGTCGCGCTGCTGCCCCCCACGCTGATCGCCAGCGTGTACGGCATGAATTTCAAGTTCA TGCCCGAACTCGATTGGGTGCTGGGCTACCCCTATGCCGTGCTGCTGATGCTGCTCAGCGCACTCGGCCCGATGTGGTAC TTTCGCCGGCGCGGTTGGTTGAAGTGA
Upstream 100 bases:
>100_bases CCTACCCGAGTCGGTAGCTTTCAGCTCCCTGGCCTGCCTGGGGGTTGAAAGCAACCCATGACCCCCCCACCGCAAACGCA CGCAACAAAGGCAGTGAGCC
Downstream 100 bases:
>100_bases CCCCCGCCCCCCGGGTCGCGCCTGCGGTGCCCGTCCGTCAAAGAGCGGCGCCTGCGGCCCGGAAAGGCCGGCTCCGCCGC GTCCTTGGGTCGGCTCAAAG
Product: magnesium and cobalt transport protein CorA
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLNIFTLVNGRLFQEEIESLEELTRFQPIWVDLQAPTVEEKRWIEQHYNLSIPDNAMDDDIEESARFYEEDNGEMHIRSD FLIDDDADPRSVRVAFILNQHNAQLKSQGVLFSIHDEDVPVFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLEN IYDELEKASRQVLAGGVTDALAGAVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAGQFEQARQILRDIESLDNH TAFLFEKINFLMAATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWVLGYPYAVLLMLLSALGPMWY FRRRGWLK
Sequences:
>Translated_328_residues MLNIFTLVNGRLFQEEIESLEELTRFQPIWVDLQAPTVEEKRWIEQHYNLSIPDNAMDDDIEESARFYEEDNGEMHIRSD FLIDDDADPRSVRVAFILNQHNAQLKSQGVLFSIHDEDVPVFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLEN IYDELEKASRQVLAGGVTDALAGAVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAGQFEQARQILRDIESLDNH TAFLFEKINFLMAATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWVLGYPYAVLLMLLSALGPMWY FRRRGWLK >Mature_328_residues MLNIFTLVNGRLFQEEIESLEELTRFQPIWVDLQAPTVEEKRWIEQHYNLSIPDNAMDDDIEESARFYEEDNGEMHIRSD FLIDDDADPRSVRVAFILNQHNAQLKSQGVLFSIHDEDVPVFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLEN IYDELEKASRQVLAGGVTDALAGAVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAGQFEQARQILRDIESLDNH TAFLFEKINFLMAATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWVLGYPYAVLLMLLSALGPMWY FRRRGWLK
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=328, Percent_Identity=45.7317073170732, Blast_Score=273, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37725; Mature: 37725
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNIFTLVNGRLFQEEIESLEELTRFQPIWVDLQAPTVEEKRWIEQHYNLSIPDNAMDDD CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC IEESARFYEEDNGEMHIRSDFLIDDDADPRSVRVAFILNQHNAQLKSQGVLFSIHDEDVP HHHHHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEEEECCCCHHHHCCCEEEECCCCCH VFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLENIYDELEKASRQVLAGGVTDA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH LAGAVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAGQFEQARQILRDIESLDNH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCH TAFLFEKINFLMAATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWV HHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHCCHHHHHHHHCCCEEECCCCHHH LGYPYAVLLMLLSALGPMWYFRRRGWLK HCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLNIFTLVNGRLFQEEIESLEELTRFQPIWVDLQAPTVEEKRWIEQHYNLSIPDNAMDDD CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCC IEESARFYEEDNGEMHIRSDFLIDDDADPRSVRVAFILNQHNAQLKSQGVLFSIHDEDVP HHHHHHHHHCCCCCEEEEECEEECCCCCCCEEEEEEEEECCCCHHHHCCCEEEECCCCCH VFRLLRMRARRAPGLIEDAKEVLLKLFDADAEYSADTLENIYDELEKASRQVLAGGVTDA HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH LAGAVLAAIARQEDLNGRIRRNVMDTRRAVSFMMRSKMLNAGQFEQARQILRDIESLDNH HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCH TAFLFEKINFLMAATVGFININQNKIIKIFSVASVALLPPTLIASVYGMNFKFMPELDWV HHHHHHHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHCCHHHHHHHHCCCEEECCCCHHH LGYPYAVLLMLLSALGPMWYFRRRGWLK HCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]