| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ada [H]
Identifier: 121609516
GI number: 121609516
Start: 2891341
End: 2893086
Strand: Direct
Name: ada [H]
Synonym: Veis_2560
Alternate gene names: 121609516
Gene position: 2891341-2893086 (Clockwise)
Preceding gene: 121609506
Following gene: 121609517
Centisome position: 51.94
GC content: 71.53
Gene sequence:
>1746_bases ATGTCCGAAAACAGCCAGTGCCGGCGCCGGCCAGTTCTTATGATGCGGCCCATGACACAGCCCCCACAGCCTGCTTGCGC ACCGGCCGCAGACGCCTCGGATGAGGGCCGCTACCTGGCGCTGCTGGCCCGCGACGCGCGCTTTGACGGGCATTTTTTCA CCGGCGTGACATCCACCGGCATCTACTGCCGCCCGGTCTGCGCCGTGCGCACACCCCGGCGTGACAACTGCCGCTTCTTC ACGCTGGCCGCCCAGGCCGAACGGGCCGGCTTTCGCCCCTGTCTGCGCTGCCGGCCCGAACTGGCGCCCCAGGCGCTGCG CTGGTCGCTGCAGGACGCCAGCGCCGTCTTGGTGCAACAGGCCGTGCGCCTGCTCGACGCCCCCGAACTGTGGGCGCCAG CGCCGCAACAGGCCGCTCAGGCCGCTCAGGCCGGCCATACCGGCGCCGTCGCCCGGCTGGCGCAACGCCTGGGCGTGAGC GACCGCCACCTGCGCCGCATTTTCGAGGCCGCCCTGGGCGTATCGCCGCTGCAATACCTGCAAACGCGGCGGCTGCTGAC CGCCAAGCAGTTGCTGACCGACACCACGATGCCCGTCACCGACATAGCCCTGGCCAGCGGCTTTGCCAGCCTGCGCCGCT TCAACGCCGCGTTTGCCGGGCATTACCGTCTGAACCCCACACAATTGCGCCGCAGCGGCGCCGATACCGCTGCACCCACG CAATGCAGTGACGCCAGCGTCATCACACCCGCGCAACGCAGCGGCGCCAGCGCCATACCAATGCAACGCAGTGACACCAA TGCCACAGCCACGCAACGCAGTGGCACCAACGCCACTGCGGGCCACACCGGCGAACTGCGCCTGGCCTGGCGCCCGCCGC TGGACGTGGCTGCGCTGCTGGCATTTTTTGCCCGCCGGCAGTTGCACGGCGTGGAGTGGGTGCTGCCGGACGGCGCCGGC CCGATCCTGCGGCGCACCGTGCGGCTGGCGCCCGGCTGCACCGGGCAGCCCCGGGAGATCATCGGCTGGATCAGCGCCCG CTTCGATGGCAGCCGCCATCTGCTGCTGTTGCAGGCCAGCGACAGCCTGTACCCGGTGTTGCCACTCGTGATCCGCCGGG TGCGCGCGCTGCTGGACCTCGATGCCGACCCTGCCGCCATCAACGCCGTGCTGCACCCGCATTTTCCGCAAGGCGATGGC TTGCGGCTGCCCGGCGCGTTTGACGGCTTCGAACTGGCCGTGCGGGCCGTGCTGGGCCAGCAAGTCACGCTGGCAGCGGC GCGCACGCTCGGCCAGCGCCTGGTCGAGCGGCTGGGCCAGACCATTGCCACCCCCTGGCCCGAACTCCAGCGCCTGTTCC CCGCCCCCGCCACGCTGGCCGCCACCGATGGCGCGGTGCTCGGCCAGATGGGCATCGTGCGCCAGCGCCAAGCCGCCATC GTGGCACTGGCGCGCGCGGTCGACGGCGGCCAGTTGGCCCTGCATGACGGCGCCGATCCGGAAAAAACCACGGCCGCCCT GTGCGCCCTGCCCGGCATTGGCGACTGGACCGCGCAATACATCGCGATGCGGGTGCTGCGCTGGCCCGATGCGTTTCCGT CCGGCGATGTCGCGCTGCACAAGGCGCTGGGCCTGCAAGGGCAGAAAAACCCGGCCCGCGCCGCCACCGCCGCCGCGCAG GCTTGGCGCCCCTGGCGCAGCTACGCGCTGCTACGGGCCTGGGCCGGCGCAGCCGCGCAGGCATGA
Upstream 100 bases:
>100_bases GCTGCGCGATGCGCCTTGCGCTGCGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCCGTGACGCGACAGTACCCAT GGCTTGACGCCTGTAGTCAC
Downstream 100 bases:
>100_bases GACATCCTGTGTCAACCCCACCCCGCCGTTTTGCCAGGCCATCGAGCGCCGCCCGGCCGCCCGAAGGTGCTCATACCGTA GCCAAAGGCGAAGGCACTCC
Product: Ada metal-binding domain-containing protein
Products: NA
Alternate protein names: Regulatory protein of adaptative response; Methylated-DNA--protein-cysteine methyltransferase; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSENSQCRRRPVLMMRPMTQPPQPACAPAADASDEGRYLALLARDARFDGHFFTGVTSTGIYCRPVCAVRTPRRDNCRFF TLAAQAERAGFRPCLRCRPELAPQALRWSLQDASAVLVQQAVRLLDAPELWAPAPQQAAQAAQAGHTGAVARLAQRLGVS DRHLRRIFEAALGVSPLQYLQTRRLLTAKQLLTDTTMPVTDIALASGFASLRRFNAAFAGHYRLNPTQLRRSGADTAAPT QCSDASVITPAQRSGASAIPMQRSDTNATATQRSGTNATAGHTGELRLAWRPPLDVAALLAFFARRQLHGVEWVLPDGAG PILRRTVRLAPGCTGQPREIIGWISARFDGSRHLLLLQASDSLYPVLPLVIRRVRALLDLDADPAAINAVLHPHFPQGDG LRLPGAFDGFELAVRAVLGQQVTLAAARTLGQRLVERLGQTIATPWPELQRLFPAPATLAATDGAVLGQMGIVRQRQAAI VALARAVDGGQLALHDGADPEKTTAALCALPGIGDWTAQYIAMRVLRWPDAFPSGDVALHKALGLQGQKNPARAATAAAQ AWRPWRSYALLRAWAGAAAQA
Sequences:
>Translated_581_residues MSENSQCRRRPVLMMRPMTQPPQPACAPAADASDEGRYLALLARDARFDGHFFTGVTSTGIYCRPVCAVRTPRRDNCRFF TLAAQAERAGFRPCLRCRPELAPQALRWSLQDASAVLVQQAVRLLDAPELWAPAPQQAAQAAQAGHTGAVARLAQRLGVS DRHLRRIFEAALGVSPLQYLQTRRLLTAKQLLTDTTMPVTDIALASGFASLRRFNAAFAGHYRLNPTQLRRSGADTAAPT QCSDASVITPAQRSGASAIPMQRSDTNATATQRSGTNATAGHTGELRLAWRPPLDVAALLAFFARRQLHGVEWVLPDGAG PILRRTVRLAPGCTGQPREIIGWISARFDGSRHLLLLQASDSLYPVLPLVIRRVRALLDLDADPAAINAVLHPHFPQGDG LRLPGAFDGFELAVRAVLGQQVTLAAARTLGQRLVERLGQTIATPWPELQRLFPAPATLAATDGAVLGQMGIVRQRQAAI VALARAVDGGQLALHDGADPEKTTAALCALPGIGDWTAQYIAMRVLRWPDAFPSGDVALHKALGLQGQKNPARAATAAAQ AWRPWRSYALLRAWAGAAAQA >Mature_580_residues SENSQCRRRPVLMMRPMTQPPQPACAPAADASDEGRYLALLARDARFDGHFFTGVTSTGIYCRPVCAVRTPRRDNCRFFT LAAQAERAGFRPCLRCRPELAPQALRWSLQDASAVLVQQAVRLLDAPELWAPAPQQAAQAAQAGHTGAVARLAQRLGVSD RHLRRIFEAALGVSPLQYLQTRRLLTAKQLLTDTTMPVTDIALASGFASLRRFNAAFAGHYRLNPTQLRRSGADTAAPTQ CSDASVITPAQRSGASAIPMQRSDTNATATQRSGTNATAGHTGELRLAWRPPLDVAALLAFFARRQLHGVEWVLPDGAGP ILRRTVRLAPGCTGQPREIIGWISARFDGSRHLLLLQASDSLYPVLPLVIRRVRALLDLDADPAAINAVLHPHFPQGDGL RLPGAFDGFELAVRAVLGQQVTLAAARTLGQRLVERLGQTIATPWPELQRLFPAPATLAATDGAVLGQMGIVRQRQAAIV ALARAVDGGQLALHDGADPEKTTAALCALPGIGDWTAQYIAMRVLRWPDAFPSGDVALHKALGLQGQKNPARAATAAAQA WRPWRSYALLRAWAGAAAQA
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus [H]
COG id: COG2169
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788383, Length=288, Percent_Identity=34.7222222222222, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1788542, Length=236, Percent_Identity=29.6610169491525, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR010316 - InterPro: IPR011257 - InterPro: IPR003265 - InterPro: IPR003583 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR023170 - InterPro: IPR012294 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF06029 AlkA_N; PF00730 HhH-GPD [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 62528; Mature: 62397
Theoretical pI: Translated: 11.17; Mature: 11.17
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENSQCRRRPVLMMRPMTQPPQPACAPAADASDEGRYLALLARDARFDGHFFTGVTSTG CCCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC IYCRPVCAVRTPRRDNCRFFTLAAQAERAGFRPCLRCRPELAPQALRWSLQDASAVLVQQ CEEEEHHHCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH AVRLLDAPELWAPAPQQAAQAAQAGHTGAVARLAQRLGVSDRHLRRIFEAALGVSPLQYL HHHHHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH QTRRLLTAKQLLTDTTMPVTDIALASGFASLRRFNAAFAGHYRLNPTQLRRSGADTAAPT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC QCSDASVITPAQRSGASAIPMQRSDTNATATQRSGTNATAGHTGELRLAWRPPLDVAALL CCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH AFFARRQLHGVEWVLPDGAGPILRRTVRLAPGCTGQPREIIGWISARFDGSRHLLLLQAS HHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC DSLYPVLPLVIRRVRALLDLDADPAAINAVLHPHFPQGDGLRLPGAFDGFELAVRAVLGQ CCCCHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCEECCCCCCHHHHHHHHHHCC QVTLAAARTLGQRLVERLGQTIATPWPELQRLFPAPATLAATDGAVLGQMGIVRQRQAAI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHH VALARAVDGGQLALHDGADPEKTTAALCALPGIGDWTAQYIAMRVLRWPDAFPSGDVALH HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH KALGLQGQKNPARAATAAAQAWRPWRSYALLRAWAGAAAQA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SENSQCRRRPVLMMRPMTQPPQPACAPAADASDEGRYLALLARDARFDGHFFTGVTSTG CCCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC IYCRPVCAVRTPRRDNCRFFTLAAQAERAGFRPCLRCRPELAPQALRWSLQDASAVLVQQ CEEEEHHHCCCCCCCCCEEEEEECHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH AVRLLDAPELWAPAPQQAAQAAQAGHTGAVARLAQRLGVSDRHLRRIFEAALGVSPLQYL HHHHHCCCHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH QTRRLLTAKQLLTDTTMPVTDIALASGFASLRRFNAAFAGHYRLNPTQLRRSGADTAAPT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCC QCSDASVITPAQRSGASAIPMQRSDTNATATQRSGTNATAGHTGELRLAWRPPLDVAALL CCCCCCEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHH AFFARRQLHGVEWVLPDGAGPILRRTVRLAPGCTGQPREIIGWISARFDGSRHLLLLQAS HHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEECC DSLYPVLPLVIRRVRALLDLDADPAAINAVLHPHFPQGDGLRLPGAFDGFELAVRAVLGQ CCCCHHHHHHHHHHHHHHCCCCCHHHHHHEECCCCCCCCCEECCCCCCHHHHHHHHHHCC QVTLAAARTLGQRLVERLGQTIATPWPELQRLFPAPATLAATDGAVLGQMGIVRQRQAAI HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHH VALARAVDGGQLALHDGADPEKTTAALCALPGIGDWTAQYIAMRVLRWPDAFPSGDVALH HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH KALGLQGQKNPARAATAAAQAWRPWRSYALLRAWAGAAAQA HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]