| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609440
Identifier: 121609440
GI number: 121609440
Start: 2817874
End: 2818458
Strand: Direct
Name: 121609440
Synonym: Veis_2484
Alternate gene names: NA
Gene position: 2817874-2818458 (Clockwise)
Preceding gene: 121609439
Following gene: 121609441
Centisome position: 50.62
GC content: 57.09
Gene sequence:
>585_bases TTGTATCTGAACCCGCCGCAGCATGCGGCCGTCTTCAGCGTCGACGAGAAGACGGCGATTCAGGCGCTCGATCGCAAAAA CCCGGTGCTGCCGCTCACGCCGGGACGTGCCGAGCGTCATGGCTTTGAGTACTTCAGGCATGGAACGCTCTCGCTGTACG CCGCCTTCAATACCAAGACTGGTGAAGTGCTGGGCAAGACCGCCACGCGGCATACCTCGTCCGAGTTCGTCGCCTTCCTC GCCGACATCGTGGCCCATCAGCCGCGCGGCAAGGAAATTCACGTCATCGTCGACAACCTCTCGGCACACAAGACGAAGCT GGTTGACGCGTTCCTCCGTGAGCATCCGAACCTGCGTATGCACTTCACGCCGACCTACTCGTCATGGCTCAACCAGGTTG AACTGTGGTTCGCCAAGATTGAGCGCGACGTGATCGCTCGCGGCGTATTCACCTCGGTACCCGATCTCAAGAGAAAGCTC ATGCGCTACATCCGCAAGTACGACGAGCAACCCAAGTCCGTGAAGTGGAAGTACTTTGATCCAACTTGGAAAATTACTAC TGATTCAATCATTACAGTCCACTAG
Upstream 100 bases:
>100_bases GCTAATCTGGGCCAAGCACGGACTCAAACCGCATCGGCTCGAAGGCTATCTCGCCTCCAACGATCCGGACTTTGAAACCA AGGCAGCCGATGTCATCGGC
Downstream 100 bases:
>100_bases ACGGTACGGTATCATGGTCAGGTCTTTTCGGGCATTCGAAATTATTTTCTCGAACCGATATCATGCAACGAGTTTCGATA AGGAACAGCAACATGGATCA
Product: putative transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; Isrso5-Transposase Protein; ISMsm2 Transposase; ISMsm5 Transposase; Integrase Catalytic Subunit; Aminoglycoside Phosphotransferase; ISPsy1 Transposase; Inactivated Transposase; Integrase Catalytic Domain-Containing Protein; Transposase Related Protein; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; Transposase Fragment
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MYLNPPQHAAVFSVDEKTAIQALDRKNPVLPLTPGRAERHGFEYFRHGTLSLYAAFNTKTGEVLGKTATRHTSSEFVAFL ADIVAHQPRGKEIHVIVDNLSAHKTKLVDAFLREHPNLRMHFTPTYSSWLNQVELWFAKIERDVIARGVFTSVPDLKRKL MRYIRKYDEQPKSVKWKYFDPTWKITTDSIITVH
Sequences:
>Translated_194_residues MYLNPPQHAAVFSVDEKTAIQALDRKNPVLPLTPGRAERHGFEYFRHGTLSLYAAFNTKTGEVLGKTATRHTSSEFVAFL ADIVAHQPRGKEIHVIVDNLSAHKTKLVDAFLREHPNLRMHFTPTYSSWLNQVELWFAKIERDVIARGVFTSVPDLKRKL MRYIRKYDEQPKSVKWKYFDPTWKITTDSIITVH >Mature_194_residues MYLNPPQHAAVFSVDEKTAIQALDRKNPVLPLTPGRAERHGFEYFRHGTLSLYAAFNTKTGEVLGKTATRHTSSEFVAFL ADIVAHQPRGKEIHVIVDNLSAHKTKLVDAFLREHPNLRMHFTPTYSSWLNQVELWFAKIERDVIARGVFTSVPDLKRKL MRYIRKYDEQPKSVKWKYFDPTWKITTDSIITVH
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22461; Mature: 22461
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNPPQHAAVFSVDEKTAIQALDRKNPVLPLTPGRAERHGFEYFRHGTLSLYAAFNTKT CCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC GEVLGKTATRHTSSEFVAFLADIVAHQPRGKEIHVIVDNLSAHKTKLVDAFLREHPNLRM CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEE HFTPTYSSWLNQVELWFAKIERDVIARGVFTSVPDLKRKLMRYIRKYDEQPKSVKWKYFD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC PTWKITTDSIITVH CCEEEECCCEEEEC >Mature Secondary Structure MYLNPPQHAAVFSVDEKTAIQALDRKNPVLPLTPGRAERHGFEYFRHGTLSLYAAFNTKT CCCCCCCCCEEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC GEVLGKTATRHTSSEFVAFLADIVAHQPRGKEIHVIVDNLSAHKTKLVDAFLREHPNLRM CHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEE HFTPTYSSWLNQVELWFAKIERDVIARGVFTSVPDLKRKLMRYIRKYDEQPKSVKWKYFD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC PTWKITTDSIITVH CCEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA