Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609441

Identifier: 121609441

GI number: 121609441

Start: 2818551

End: 2818799

Strand: Direct

Name: 121609441

Synonym: Veis_2485

Alternate gene names: NA

Gene position: 2818551-2818799 (Clockwise)

Preceding gene: 121609440

Following gene: 121609442

Centisome position: 50.63

GC content: 62.25

Gene sequence:

>249_bases
ATGGATCAACTCAATCGCATCACCCAACAGCCCGAGGTCATGGGTGGCAAGGCGTGCATCCGCGGAATGCGCGTCACGGT
CGGCATGGTCGTGGGCCAGATCGGCGCAGGTCGCAGCGCCGACGAAATCCTGACCGACTTCCCCTACCTGGAGCGCGACG
ACATCATGCAGGCGCTTCGCTACGCGGCATGGCGCGCCGATGAACGCGAGGTCATGCTGGCCACAGCATCAAGCTGTTGG
TTGATATGA

Upstream 100 bases:

>100_bases
TCCACTAGACGGTACGGTATCATGGTCAGGTCTTTTCGGGCATTCGAAATTATTTTCTCGAACCGATATCATGCAACGAG
TTTCGATAAGGAACAGCAAC

Downstream 100 bases:

>100_bases
ACCTGTCGCCCCGTTGGGTCGATGTGCTGGCCGATGCAGGAATCGAGGCGACACACTGGTCCGCGGTCGGAGCTTTCAAC
GCCCAGGACTCAGAAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MDQLNRITQQPEVMGGKACIRGMRVTVGMVVGQIGAGRSADEILTDFPYLERDDIMQALRYAAWRADEREVMLATASSCW
LI

Sequences:

>Translated_82_residues
MDQLNRITQQPEVMGGKACIRGMRVTVGMVVGQIGAGRSADEILTDFPYLERDDIMQALRYAAWRADEREVMLATASSCW
LI
>Mature_82_residues
MDQLNRITQQPEVMGGKACIRGMRVTVGMVVGQIGAGRSADEILTDFPYLERDDIMQALRYAAWRADEREVMLATASSCW
LI

Specific function: Unknown

COG id: COG2442

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9178; Mature: 9178

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQLNRITQQPEVMGGKACIRGMRVTVGMVVGQIGAGRSADEILTDFPYLERDDIMQALR
CCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHH
YAAWRADEREVMLATASSCWLI
HHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MDQLNRITQQPEVMGGKACIRGMRVTVGMVVGQIGAGRSADEILTDFPYLERDDIMQALR
CCHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHH
YAAWRADEREVMLATASSCWLI
HHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA