| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is ygbL [C]
Identifier: 121609417
GI number: 121609417
Start: 2795870
End: 2796763
Strand: Direct
Name: ygbL [C]
Synonym: Veis_2461
Alternate gene names: 121609417
Gene position: 2795870-2796763 (Clockwise)
Preceding gene: 121609416
Following gene: 121609418
Centisome position: 50.22
GC content: 72.82
Gene sequence:
>894_bases ATGAACCAGCGCCCGGAATCACCGGACGGCGACGAACGGCAAGCCCGGGCGGAGATCTGCCGTGTGGGCCGCCGCCTGTT CGGGCGCGGCGACGGGCACGCCAGCGCCGGCAACATCGGCGTGCGGCTGGCCGATGACTGCCTGATCACGCCCACCGACG CCTGCCCGGGCACGCCCGCGCCCGAGCGCCTGGCCCGGTTCGATGCCCGGGGCCGGCAACTGTCTGGCGCTCGCGCCAGC AAGGCCATTGCGCTGCACCGCCACCTCTGCGCCGTCTGCGCCGCGTCGGCCAGCACCGCCGCGCCTGCGTGCTGCGTCAT CCATACCCACAGCACAAGCCTGGTGTCGCGTCATCGGTCAGATGTCGTAGGCTGCGCGCAGCCATCGGAGCGCAGCGCCA GGCGCAGCGCGCAGCCCATACCGAGCGTATTGGCAAGCGATGCAACGCCGCGATGCGCTCCGATGGCCAGCGCAGACCGA CAGATGATCGGTGACTCGACACGGGTGTCCTGCTCGTTGCCAAGCGATGCGGCGGCAGACGGGCCGCTGGCGCCGGATGC GCAACTGCGCGCGCCGATCACGCCCTGCTTCGTGATGAAGCTGGGCCGCGTGCCCCCTATTCCCTATCACCGCCCGGGCG CGCCCGAGGCCGCCAAGGCGGTGGCGCAGACCACCGCGCGCGACACGCCCCCAGGCCGCCCGATCCGGGCCGTGATGCTG GCGCGCCTGGCGCCCAATGTCTGGCACGACAACCCCGCCGCCGCGATGGCCGCGCTCGAAGCACGGGAAGAAACCGCGCG CCCGTGGCTGCCGTGCCAGCCCCGCCATGCCCCGACCCCGCCGACCGGGCCGCGCATTGCAGAACTGCGCCAGACCTTTG GCGCCCATCGGTAA
Upstream 100 bases:
>100_bases CGCGGTCGCCCCTGGCGCCCGAGGGCCTGCACATCGCGCTCAAGTCAGGTAACTTTGGCCGCAGCGACTTCTTTCGCGCG GCGTTTGCCCGATTGCCGGC
Downstream 100 bases:
>100_bases ACCATGTAAATCATGCAAACCATGTAAACCCCGCAGACCACGGAAGACCCCCCCATGCCCCGCTTTGCCGCCAACCTCTC GATGCTCTACAACGAGGTAG
Product: class II aldolase/adducin-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MNQRPESPDGDERQARAEICRVGRRLFGRGDGHASAGNIGVRLADDCLITPTDACPGTPAPERLARFDARGRQLSGARAS KAIALHRHLCAVCAASASTAAPACCVIHTHSTSLVSRHRSDVVGCAQPSERSARRSAQPIPSVLASDATPRCAPMASADR QMIGDSTRVSCSLPSDAAADGPLAPDAQLRAPITPCFVMKLGRVPPIPYHRPGAPEAAKAVAQTTARDTPPGRPIRAVML ARLAPNVWHDNPAAAMAALEAREETARPWLPCQPRHAPTPPTGPRIAELRQTFGAHR
Sequences:
>Translated_297_residues MNQRPESPDGDERQARAEICRVGRRLFGRGDGHASAGNIGVRLADDCLITPTDACPGTPAPERLARFDARGRQLSGARAS KAIALHRHLCAVCAASASTAAPACCVIHTHSTSLVSRHRSDVVGCAQPSERSARRSAQPIPSVLASDATPRCAPMASADR QMIGDSTRVSCSLPSDAAADGPLAPDAQLRAPITPCFVMKLGRVPPIPYHRPGAPEAAKAVAQTTARDTPPGRPIRAVML ARLAPNVWHDNPAAAMAALEAREETARPWLPCQPRHAPTPPTGPRIAELRQTFGAHR >Mature_297_residues MNQRPESPDGDERQARAEICRVGRRLFGRGDGHASAGNIGVRLADDCLITPTDACPGTPAPERLARFDARGRQLSGARAS KAIALHRHLCAVCAASASTAAPACCVIHTHSTSLVSRHRSDVVGCAQPSERSARRSAQPIPSVLASDATPRCAPMASADR QMIGDSTRVSCSLPSDAAADGPLAPDAQLRAPITPCFVMKLGRVPPIPYHRPGAPEAAKAVAQTTARDTPPGRPIRAVML ARLAPNVWHDNPAAAMAALEAREETARPWLPCQPRHAPTPPTGPRIAELRQTFGAHR
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31385; Mature: 31385
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRPESPDGDERQARAEICRVGRRLFGRGDGHASAGNIGVRLADDCLITPTDACPGTPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCC PERLARFDARGRQLSGARASKAIALHRHLCAVCAASASTAAPACCVIHTHSTSLVSRHRS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH DVVGCAQPSERSARRSAQPIPSVLASDATPRCAPMASADRQMIGDSTRVSCSLPSDAAAD CCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC GPLAPDAQLRAPITPCFVMKLGRVPPIPYHRPGAPEAAKAVAQTTARDTPPGRPIRAVML CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH ARLAPNVWHDNPAAAMAALEAREETARPWLPCQPRHAPTPPTGPRIAELRQTFGAHR HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNQRPESPDGDERQARAEICRVGRRLFGRGDGHASAGNIGVRLADDCLITPTDACPGTPA CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCCCCCCCCC PERLARFDARGRQLSGARASKAIALHRHLCAVCAASASTAAPACCVIHTHSTSLVSRHRS HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHH DVVGCAQPSERSARRSAQPIPSVLASDATPRCAPMASADRQMIGDSTRVSCSLPSDAAAD CCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC GPLAPDAQLRAPITPCFVMKLGRVPPIPYHRPGAPEAAKAVAQTTARDTPPGRPIRAVML CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH ARLAPNVWHDNPAAAMAALEAREETARPWLPCQPRHAPTPPTGPRIAELRQTFGAHR HHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA