| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121639026
Identifier: 121639026
GI number: 121639026
Start: 3462701
End: 3463102
Strand: Direct
Name: 121639026
Synonym: BCG_3166
Alternate gene names: NA
Gene position: 3462701-3463102 (Clockwise)
Preceding gene: 121639024
Following gene: 121639028
Centisome position: 79.16
GC content: 66.17
Gene sequence:
>402_bases GTGCCCGACTCCAGCACCGCATTGCGGATCCTCGTCTACAGCGACAACGTCCAGACCCGCGAACGGGTGATGCGGGCCCT GGGCAAACGGTTGCACCCGGATCTGCCCGATTTGACCTACGTCGAAGTGGCTACCGGTCCGATGGTGATACGCCAGATGG ATCGGGGGGGCATCGACTTGGCCATCCTCGACGGTGAGGCGACACCGACCGGAGGCATGGGAATCGCCAAACAGCTCAAA GACGAACTTGCCAGTTGCCCGCCCATCCTGGTGCTCACCGGCCGTCCGGACGACACCTGGCTGGCCAGCTGGTCGCGGGC CGAGGCCGCAGTGCCGCATCCCGTCGACCCCATCGTGCTGGGCCGCACGGTGCTCTCACTGTTGCGCGCACCCGCCCACT AA
Upstream 100 bases:
>100_bases CTCTGGCCTTGTTGTGCCCATATGTCACGTACACAACCGCCGAAATCTCGTGCGGGATTACACCCTAGGCGTCCGATGGA CACCAGTACCATCTGACACC
Downstream 100 bases:
>100_bases CCGGACGCGGCCGGCATTCGCGGCGCGAACGTTCAGCCGCCCCGCATTTGAATCTTCGGGTCCTGTCTTACCCGAGGTCG TAATTGGCCCGCTGCCGCTT
Product: putative response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPDSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAILDGEATPTGGMGIAKQLK DELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGRTVLSLLRAPAH
Sequences:
>Translated_133_residues MPDSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAILDGEATPTGGMGIAKQLK DELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGRTVLSLLRAPAH >Mature_132_residues PDSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDLAILDGEATPTGGMGIAKQLKD ELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGRTVLSLLRAPAH
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3143_MYCTU (P95183)
Other databases:
- EMBL: BX842582 - EMBL: AE000516 - PIR: H70646 - RefSeq: NP_217659.1 - RefSeq: NP_337756.1 - ProteinModelPortal: P95183 - EnsemblBacteria: EBMYCT00000001692 - EnsemblBacteria: EBMYCT00000069730 - GeneID: 887576 - GeneID: 923394 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3230 - KEGG: mtu:Rv3143 - TIGR: MT3230 - TubercuList: Rv3143 - GeneTree: EBGT00050000017573 - HOGENOM: HBG564898 - OMA: DAWLASW - ProtClustDB: CLSK872145 - InterPro: IPR011006 - InterPro: IPR001789 - SMART: SM00448
Pfam domain/function: SSF52172 CheY_like
EC number: NA
Molecular weight: Translated: 14386; Mature: 14255
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDL CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEE AILDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVL EEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCHHHH GRTVLSLLRAPAH HHHHHHHHHCCCC >Mature Secondary Structure PDSSTALRILVYSDNVQTRERVMRALGKRLHPDLPDLTYVEVATGPMVIRQMDRGGIDL CCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCEEE AILDGEATPTGGMGIAKQLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVL EEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCHHHH GRTVLSLLRAPAH HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036