Click here to switch to the map view.

The map label for this gene is fadB4 [H]

Identifier: 121639024

GI number: 121639024

Start: 3461142

End: 3462113

Strand: Direct

Name: fadB4 [H]

Synonym: BCG_3164

Alternate gene names: 121639024

Gene position: 3461142-3462113 (Clockwise)

Preceding gene: 121639023

Following gene: 121639026

Centisome position: 79.12

GC content: 67.18

Gene sequence:

>972_bases
ATGCGCGCGGTACGGGTGACTCGGCTGGAGGGACCAGATGCGGTCGAGGTGGCCGAGGTCGAGGAACCCACGAGCGCCGG
TGTGGTCATCGAGGTGCACGCTGCCGGCGTGGCCTTCCCGGACGCACTGCTAACCCGTGGCCGTTACCAGTACCGCCCGG
AGCCGCCATTCGTGCTCGGCGCCGAGATCGCCGGAGTGGTTCGATCGGCGCCGGATAACAGCCAAGTGCGTTCCGGAGAC
AGGGTTGTCGGCCTCACGATGCTCACCGGCGGCATGGCCGAAGTCGCGGTATTGTCGCCCGAGCGCGTGTTCAAGCTGCC
GGACAACATGACTTTCGAGGCGGGCGCGGGCGTGCTGTTCAACGACCTGACGGTGTACTTCGCGCTGGCGGTCCGGGGCC
GGCTGCAGGCCGGTGAGACGGTGCTGGTGCACGGGGCGGCAGGCGGGATCGGCACATCGACGTTGCGACTAGCGCCGGCG
CTCGGGGCGTCTCGCACCGTCGCGGTGGTCAGCACGCAGGAGAAGGCCGAGCTTGCGACAGTGGCCGGGGCGACAGATGT
GGTGTTGGCCGAGGGGTTCAAGGACGCGGTACAGGAGCTGACGAACGGCCGTGGTGTCGACATCGTCGTAGACCCGGTCG
GCGGCGACCGGTTCACCGATTCGCTGCGCTCGCTTGCTGCGGGAGGACGGCTGTTGGTCATCGGCTTCACTGGCGGCGAG
ATTCCCACCGTGAAGGTAAACCGCCTTCTGCTCAACAACATTGACGTTGTCGGGGTAGGCTGGGGCGCCTGGTCGCTGAC
CCACCCCGATGCGCTGGCCCAGCAGTGGTCACAACTCGAGCGGCTGCTACGCTCGGGCAAGCTGCCTCCTCCCGAACCAG
TGGTCTACCCACTGGACCAAGCCGCTGCGGCGATTGCATCGCTGGAGAATCGCACCGCCAAGGGGAAGGTCGTACTACGC
GTGCGCGACTAA

Upstream 100 bases:

>100_bases
GCCTCGGCGAGCAGACGTCAAAGCCCCCGAATTTCAGTGAAATCGGGGGCTTTTGCGTCTGCTGGCGCCCGTCTGCACCC
CCGCCAGTAGGCTGGTCGGC

Downstream 100 bases:

>100_bases
CGCCCCTCCCGGGACGCGTCGCCGCCGTGCTCTGGCCAATTTGCCGCTTCCTCACTGGTCGCCGTTGGCGTCGGCTACGT
CATGCCGCACAACTCGCAGC

Product: putative NADPH quinone oxidoreductase fadB4

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRAVRVTRLEGPDAVEVAEVEEPTSAGVVIEVHAAGVAFPDALLTRGRYQYRPEPPFVLGAEIAGVVRSAPDNSQVRSGD
RVVGLTMLTGGMAEVAVLSPERVFKLPDNMTFEAGAGVLFNDLTVYFALAVRGRLQAGETVLVHGAAGGIGTSTLRLAPA
LGASRTVAVVSTQEKAELATVAGATDVVLAEGFKDAVQELTNGRGVDIVVDPVGGDRFTDSLRSLAAGGRLLVIGFTGGE
IPTVKVNRLLLNNIDVVGVGWGAWSLTHPDALAQQWSQLERLLRSGKLPPPEPVVYPLDQAAAAIASLENRTAKGKVVLR
VRD

Sequences:

>Translated_323_residues
MRAVRVTRLEGPDAVEVAEVEEPTSAGVVIEVHAAGVAFPDALLTRGRYQYRPEPPFVLGAEIAGVVRSAPDNSQVRSGD
RVVGLTMLTGGMAEVAVLSPERVFKLPDNMTFEAGAGVLFNDLTVYFALAVRGRLQAGETVLVHGAAGGIGTSTLRLAPA
LGASRTVAVVSTQEKAELATVAGATDVVLAEGFKDAVQELTNGRGVDIVVDPVGGDRFTDSLRSLAAGGRLLVIGFTGGE
IPTVKVNRLLLNNIDVVGVGWGAWSLTHPDALAQQWSQLERLLRSGKLPPPEPVVYPLDQAAAAIASLENRTAKGKVVLR
VRD
>Mature_323_residues
MRAVRVTRLEGPDAVEVAEVEEPTSAGVVIEVHAAGVAFPDALLTRGRYQYRPEPPFVLGAEIAGVVRSAPDNSQVRSGD
RVVGLTMLTGGMAEVAVLSPERVFKLPDNMTFEAGAGVLFNDLTVYFALAVRGRLQAGETVLVHGAAGGIGTSTLRLAPA
LGASRTVAVVSTQEKAELATVAGATDVVLAEGFKDAVQELTNGRGVDIVVDPVGGDRFTDSLRSLAAGGRLLVIGFTGGE
IPTVKVNRLLLNNIDVVGVGWGAWSLTHPDALAQQWSQLERLLRSGKLPPPEPVVYPLDQAAAAIASLENRTAKGKVVLR
VRD

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI194239674, Length=328, Percent_Identity=30.4878048780488, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI13236495, Length=328, Percent_Identity=30.4878048780488, Blast_Score=142, Evalue=4e-34,
Organism=Homo sapiens, GI194239676, Length=191, Percent_Identity=35.6020942408377, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI41872631, Length=317, Percent_Identity=29.3375394321767, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI18379349, Length=311, Percent_Identity=28.6173633440514, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI22538446, Length=334, Percent_Identity=26.0479041916168, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI22538444, Length=334, Percent_Identity=26.0479041916168, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI24308257, Length=322, Percent_Identity=27.0186335403727, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67078404, Length=289, Percent_Identity=26.643598615917, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI67078406, Length=283, Percent_Identity=26.8551236749117, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI197927207, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI47519420, Length=331, Percent_Identity=25.3776435045317, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=30.5810397553517, Blast_Score=110, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17507255, Length=330, Percent_Identity=28.7878787878788, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17556000, Length=319, Percent_Identity=26.3322884012539, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI212642053, Length=307, Percent_Identity=25.7328990228013, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17536829, Length=306, Percent_Identity=24.5098039215686, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6319520, Length=329, Percent_Identity=29.1793313069909, Blast_Score=96, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19920632, Length=308, Percent_Identity=26.2987012987013, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221330659, Length=308, Percent_Identity=26.2987012987013, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24581345, Length=338, Percent_Identity=23.9644970414201, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 33853; Mature: 33853

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVRVTRLEGPDAVEVAEVEEPTSAGVVIEVHAAGVAFPDALLTRGRYQYRPEPPFVLG
CCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCEEEC
AEIAGVVRSAPDNSQVRSGDRVVGLTMLTGGMAEVAVLSPERVFKLPDNMTFEAGAGVLF
HHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHEEECCCCCEEECCCCCHH
NDLTVYFALAVRGRLQAGETVLVHGAAGGIGTSTLRLAPALGASRTVAVVSTQEKAELAT
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHH
VAGATDVVLAEGFKDAVQELTNGRGVDIVVDPVGGDRFTDSLRSLAAGGRLLVIGFTGGE
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC
IPTVKVNRLLLNNIDVVGVGWGAWSLTHPDALAQQWSQLERLLRSGKLPPPEPVVYPLDQ
CCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHH
AAAAIASLENRTAKGKVVLRVRD
HHHHHHHHHCCCCCCEEEEEEEC
>Mature Secondary Structure
MRAVRVTRLEGPDAVEVAEVEEPTSAGVVIEVHAAGVAFPDALLTRGRYQYRPEPPFVLG
CCCEEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCEEEC
AEIAGVVRSAPDNSQVRSGDRVVGLTMLTGGMAEVAVLSPERVFKLPDNMTFEAGAGVLF
HHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHEEECCCCCEEECCCCCHH
NDLTVYFALAVRGRLQAGETVLVHGAAGGIGTSTLRLAPALGASRTVAVVSTQEKAELAT
HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCEEEEEECCCHHHHHH
VAGATDVVLAEGFKDAVQELTNGRGVDIVVDPVGGDRFTDSLRSLAAGGRLLVIGFTGGE
HCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCC
IPTVKVNRLLLNNIDVVGVGWGAWSLTHPDALAQQWSQLERLLRSGKLPPPEPVVYPLDQ
CCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHH
AAAAIASLENRTAKGKVVLRVRD
HHHHHHHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]