| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is lppZ [C]
Identifier: 121638888
GI number: 121638888
Start: 3319196
End: 3320317
Strand: Direct
Name: lppZ [C]
Synonym: BCG_3028
Alternate gene names: 121638888
Gene position: 3319196-3320317 (Clockwise)
Preceding gene: 121638886
Following gene: 121638890
Centisome position: 75.88
GC content: 65.69
Gene sequence:
>1122_bases ATGTGGACAACGCGGTTGGTTCGATCCGGACTCGCCGCGCTGTGCGCGGCAGTGCTGGTATCGAGCGGCTGCGCACGGTT CAACGACGCTCAATCTCAGCCGTTCACCACCGAACCGGAGCTGCGGCCCCAACCCAGCTCGACACCTCCCCCCCCGCCGC CGCTGCCGCCGGTTCCCTTTCCCAAGGAATGTCCGGCGCCGGGCGTGATGCAAGGCTGCCTTGAGAGCACCAGCGGCTTG ATCATGGGCATCGACAGCAAGACCGCACTGGTCGCCGAGCGCATCACCGGTGCCGTCGAGGAGATCTCTATCAGCGCCGA GCCGAAGGTAAAGACGGTCATCCCCGTGGATCCTGCCGGTGACGGTGGCTTGATGGACATTGTGCTGTCGCCCACCTACT CGCAAGACCGGCTGATGTACGCCTACATCAGCACGCCCACCGACAACCGGGTGGTGCGAGTGGCCGACGGCGACATCCCC AAGGACATCCTGACCGGCATCCCCAAAGGTGCTGCCGGTAACACCGGGGCGCTGATCTTCACCAGTCCCACCACGCTGGT CGTGATGACCGGGGATGCTGGCGACCCGGCGTTGGCCGCCGATCCCCAATCGTTGGCCGGTAAGGTCCTGCGTATCGAAC AGCCCACCACCATCGACCAGACGCCGCCGACGACGGCGCTGTCTGGCATCGGCTCCGGCGGCGGCTTGTGCATCGATCCG GTCGACGGCTCGCTATATGTCGCCGACCGCACGCCAACGGCGGACCGATTGCAGCGCATCACCAAGAACTCGGAGGTCTC TACGGTATGGACCTGGCCGGACAAGCCCGGCGTGGCCGGGTGTGCCGCGATGGACGGCACCGTGCTGGTCAACCTGATTA ATACCAAACTGACGGTGGCGGTCCGGCTCGCGCCGTCGACCGGTGCGGTCACCGGAGAACCCGACGTTGTCCGCAAAGAC ACTCATGCGCATGCGTGGGCATTACGGATGTCGCCGGACGGCAACGTCTGGGGAGCCACCGTCAACAAGACCGCCGGCGA CGCCGAGAAGCTCGACGATGTGGTGTTCCCGCTGTTCCCGCAGGGTGGCGGCTTCCCGCGCAACAACGACGACAAGACCT GA
Upstream 100 bases:
>100_bases CCTGACCAGCCCACCAAAAGGCCCCAATTGGGCCGCCATGCCGACAGTGCGCACCCCGGCAGGTGGCGGCGATGCCCACA ATGTCCGTAGCCTGTCGGTC
Downstream 100 bases:
>100_bases CCCGGTTAGGGCACGTCGAGCGTGAACCTTACGACGCCGTATCGGCGTGTCTCGTCGCCCCGTTCACGCTCGTAGAACCG GGGTGAGGCTTCCTTGCCAG
Product: putative lipoprotein lppZ
Products: NA
Alternate protein names: Oxidoreductase; Glucose Sorbosone Dehydrogenase; Glucose/Sorbosone Dehydrogenase-Like Protein; Lipoprotein LppZ; Lipoprotein; LppZ Protein; Glucose/Sorbosone Dehydrogenase
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MWTTRLVRSGLAALCAAVLVSSGCARFNDAQSQPFTTEPELRPQPSSTPPPPPPLPPVPFPKECPAPGVMQGCLESTSGL IMGIDSKTALVAERITGAVEEISISAEPKVKTVIPVDPAGDGGLMDIVLSPTYSQDRLMYAYISTPTDNRVVRVADGDIP KDILTGIPKGAAGNTGALIFTSPTTLVVMTGDAGDPALAADPQSLAGKVLRIEQPTTIDQTPPTTALSGIGSGGGLCIDP VDGSLYVADRTPTADRLQRITKNSEVSTVWTWPDKPGVAGCAAMDGTVLVNLINTKLTVAVRLAPSTGAVTGEPDVVRKD THAHAWALRMSPDGNVWGATVNKTAGDAEKLDDVVFPLFPQGGGFPRNNDDKT
Sequences:
>Translated_373_residues MWTTRLVRSGLAALCAAVLVSSGCARFNDAQSQPFTTEPELRPQPSSTPPPPPPLPPVPFPKECPAPGVMQGCLESTSGL IMGIDSKTALVAERITGAVEEISISAEPKVKTVIPVDPAGDGGLMDIVLSPTYSQDRLMYAYISTPTDNRVVRVADGDIP KDILTGIPKGAAGNTGALIFTSPTTLVVMTGDAGDPALAADPQSLAGKVLRIEQPTTIDQTPPTTALSGIGSGGGLCIDP VDGSLYVADRTPTADRLQRITKNSEVSTVWTWPDKPGVAGCAAMDGTVLVNLINTKLTVAVRLAPSTGAVTGEPDVVRKD THAHAWALRMSPDGNVWGATVNKTAGDAEKLDDVVFPLFPQGGGFPRNNDDKT >Mature_373_residues MWTTRLVRSGLAALCAAVLVSSGCARFNDAQSQPFTTEPELRPQPSSTPPPPPPLPPVPFPKECPAPGVMQGCLESTSGL IMGIDSKTALVAERITGAVEEISISAEPKVKTVIPVDPAGDGGLMDIVLSPTYSQDRLMYAYISTPTDNRVVRVADGDIP KDILTGIPKGAAGNTGALIFTSPTTLVVMTGDAGDPALAADPQSLAGKVLRIEQPTTIDQTPPTTALSGIGSGGGLCIDP VDGSLYVADRTPTADRLQRITKNSEVSTVWTWPDKPGVAGCAAMDGTVLVNLINTKLTVAVRLAPSTGAVTGEPDVVRKD THAHAWALRMSPDGNVWGATVNKTAGDAEKLDDVVFPLFPQGGGFPRNNDDKT
Specific function: Unknown
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38810; Mature: 38810
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTTRLVRSGLAALCAAVLVSSGCARFNDAQSQPFTTEPELRPQPSSTPPPPPPLPPVPF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKECPAPGVMQGCLESTSGLIMGIDSKTALVAERITGAVEEISISAEPKVKTVIPVDPAG CCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCC DGGLMDIVLSPTYSQDRLMYAYISTPTDNRVVRVADGDIPKDILTGIPKGAAGNTGALIF CCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCEEEE TSPTTLVVMTGDAGDPALAADPQSLAGKVLRIEQPTTIDQTPPTTALSGIGSGGGLCIDP ECCCEEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEC VDGSLYVADRTPTADRLQRITKNSEVSTVWTWPDKPGVAGCAAMDGTVLVNLINTKLTVA CCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCEEEEEEECCEEEEE VRLAPSTGAVTGEPDVVRKDTHAHAWALRMSPDGNVWGATVNKTAGDAEKLDDVVFPLFP EEECCCCCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHCCEEEECC QGGGFPRNNDDKT CCCCCCCCCCCCC >Mature Secondary Structure MWTTRLVRSGLAALCAAVLVSSGCARFNDAQSQPFTTEPELRPQPSSTPPPPPPLPPVPF CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PKECPAPGVMQGCLESTSGLIMGIDSKTALVAERITGAVEEISISAEPKVKTVIPVDPAG CCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCHHHEEECCCCCEEEEEECCCCC DGGLMDIVLSPTYSQDRLMYAYISTPTDNRVVRVADGDIPKDILTGIPKGAAGNTGALIF CCCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCEEEE TSPTTLVVMTGDAGDPALAADPQSLAGKVLRIEQPTTIDQTPPTTALSGIGSGGGLCIDP ECCCEEEEEECCCCCCCCCCCCHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCCCEEEEC VDGSLYVADRTPTADRLQRITKNSEVSTVWTWPDKPGVAGCAAMDGTVLVNLINTKLTVA CCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCEEEEEEECCEEEEE VRLAPSTGAVTGEPDVVRKDTHAHAWALRMSPDGNVWGATVNKTAGDAEKLDDVVFPLFP EEECCCCCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHCCEEEECC QGGGFPRNNDDKT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA