| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is cfp6
Identifier: 121638886
GI number: 121638886
Start: 3317835
End: 3318173
Strand: Direct
Name: cfp6
Synonym: BCG_3026
Alternate gene names: 121638886
Gene position: 3317835-3318173 (Clockwise)
Preceding gene: 121638882
Following gene: 121638888
Centisome position: 75.84
GC content: 69.62
Gene sequence:
>339_bases ATGGCGCACTTCGCCGTGGGATTCCTGACCCTGGGTCTGCTGGTGCCGGTACTGACCTGGCCGGTGAGCGCCCCGCTGTT AGTCATTCCGGTGGCGTTGTCGGCATCGATCATTCGGCTCCGCACGCTCGCCGACGAGCGGGGCGTGACCGTGCGGACGC TGGTCGGCAGCCGCGCGGTGCGCTGGGACGACATCGACGGGCTGCGGTTCCACCGCGGGTCCTGGGCGCGCGCAACGCTC AAGGACGGTACCGAGCTGCGATTGCCCGCGGTGACCTTTGCGACGCTGCCGCACCTGACCGAAGCCAGCTCGGGACGGGT CCCCAACCCGTACCGATGA
Upstream 100 bases:
>100_bases TTTTCGCGGTGGCGTTACGCTCGCGAACTCGACGCCCACCAAGCGGTGAGATGATGCTGGGGTGGCCACCACATCGCCGG TCGTGATCAAGGTGTCGCCG
Downstream 100 bases:
>100_bases CAGCGTTCAGGCCAGCGGATTTGCCCCGTTGAGCAGCACCCATACGGCAATACCCGCCGCGATGCCACCCAACAGCGCTA CAAACGATCCGATAAATGGC
Product: low molecular weight protein antigen 6 cfp6
Products: NA
Alternate protein names: CFP-6
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAHFAVGFLTLGLLVPVLTWPVSAPLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAVRWDDIDGLRFHRGSWARATL KDGTELRLPAVTFATLPHLTEASSGRVPNPYR
Sequences:
>Translated_112_residues MAHFAVGFLTLGLLVPVLTWPVSAPLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAVRWDDIDGLRFHRGSWARATL KDGTELRLPAVTFATLPHLTEASSGRVPNPYR >Mature_111_residues AHFAVGFLTLGLLVPVLTWPVSAPLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAVRWDDIDGLRFHRGSWARATLK DGTELRLPAVTFATLPHLTEASSGRVPNPYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CFP6_MYCBO (P0A5P3)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856674.1 - EnsemblBacteria: EBMYCT00000015525 - GeneID: 1093589 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb3029 - GeneTree: EBGT00050000017206 - HOGENOM: HBG671766 - OMA: PIAHLAV - ProtClustDB: CLSK792216 - BioCyc: MBOV233413:MB3029-MONOMER - InterPro: IPR019692 - InterPro: IPR020535 - ProDom: PD072817
Pfam domain/function: PF10756 DUF2581
EC number: NA
Molecular weight: Translated: 12223; Mature: 12092
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFAVGFLTLGLLVPVLTWPVSAPLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAV CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCC RWDDIDGLRFHRGSWARATLKDGTELRLPAVTFATLPHLTEASSGRVPNPYR CCCCCCCEEECCCCCCEEECCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AHFAVGFLTLGLLVPVLTWPVSAPLLVIPVALSASIIRLRTLADERGVTVRTLVGSRAV CHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCC RWDDIDGLRFHRGSWARATLKDGTELRLPAVTFATLPHLTEASSGRVPNPYR CCCCCCCEEECCCCCCEEECCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972