| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638352
Identifier: 121638352
GI number: 121638352
Start: 2737537
End: 2738205
Strand: Reverse
Name: 121638352
Synonym: BCG_2489c
Alternate gene names: NA
Gene position: 2738205-2737537 (Counterclockwise)
Preceding gene: 121638357
Following gene: 121638351
Centisome position: 62.59
GC content: 68.31
Gene sequence:
>669_bases ATGGCGCACGGCAAGAAGCGCCGCGGCCACCGCAGTTCCGGTGTCGCGGCAGGCGTAACCGGGCCCGCTTCATGCCTGCA CGGTGTCCACTCCCACCGACTCGCGTCAGGCGTCGAGACCCATCCACCGAACCGTCACGAGAGCGCATCGATCTGGAACC GCCGGCGGGTGCTGCTCCTGAACTCCACCTACGAGCCGCTTACCGCGTTGTCGATGCGGCGGGCGATTGTCATGGTGATC TGTGGCAAGGCCGACGTGGTGCACGAAGACCCGTCCGGGCCGGTCATCCACTCGTCGACCAGATCGATCCTGGTCCCGTC GGTGATCCAGTTGCGCTCCTATGTCCGGGTTCCCTACCGTGCCCGGGTTCCGATGACCCGGGCCGCGCTCATGCATCGGG ACCGGTTCTGTTGTGCCTACTGCGGCGGCAAGGCCGACACCGTCGACCACGTGGTACCCCGCAGCCGGGGCGGTGCCCAC TCCTGGGAGAACTGCGTTGCGTGCTGCTCGCCGTGTAACCACCGCAAGGGTGACAGGCTGTTGACCGAGCTTGGCTGGGC ACTCCGCCGGGCGCCGCTGCCGCCCACGGGACCGCACTGGCGACTGCTGTCGGCGGTCAAGGAGCTGGACCCGTCCTGGG CGCGATACCTCGGTGAGGGTGCGGCCTGA
Upstream 100 bases:
>100_bases CAGCCAGCCCCCGGTTTGTTCACCGGAGCGACACGGTGTGGACGTGGCATTTGGCGTGCGATTAGCCGCGAATCATGGTG GACTGTTCGGCGGAGGACCT
Downstream 100 bases:
>100_bases AAACCCGGTGGGATACGGTTTGCGTCGTGAGTGCTATGGAGATCCACCTCTTCTTTGTCGGTATCCCGTTGTTGCTGGTG GTTGTGCTGTCTGTGCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVI CGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAH SWENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA
Sequences:
>Translated_222_residues MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVI CGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAH SWENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA >Mature_221_residues AHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVIC GKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHS WENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24391; Mature: 24260
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEE NSTYEPLTALSMRRAIVMVICGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYR CCCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCC ARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHSWENCVACCSPCNHRKGDRL CCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHH LTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure AHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEE NSTYEPLTALSMRRAIVMVICGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYR CCCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCC ARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHSWENCVACCSPCNHRKGDRL CCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHH LTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA