Definition Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
Accession NC_008769
Length 4,374,522

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The map label for this gene is 121638352

Identifier: 121638352

GI number: 121638352

Start: 2737537

End: 2738205

Strand: Reverse

Name: 121638352

Synonym: BCG_2489c

Alternate gene names: NA

Gene position: 2738205-2737537 (Counterclockwise)

Preceding gene: 121638357

Following gene: 121638351

Centisome position: 62.59

GC content: 68.31

Gene sequence:

>669_bases
ATGGCGCACGGCAAGAAGCGCCGCGGCCACCGCAGTTCCGGTGTCGCGGCAGGCGTAACCGGGCCCGCTTCATGCCTGCA
CGGTGTCCACTCCCACCGACTCGCGTCAGGCGTCGAGACCCATCCACCGAACCGTCACGAGAGCGCATCGATCTGGAACC
GCCGGCGGGTGCTGCTCCTGAACTCCACCTACGAGCCGCTTACCGCGTTGTCGATGCGGCGGGCGATTGTCATGGTGATC
TGTGGCAAGGCCGACGTGGTGCACGAAGACCCGTCCGGGCCGGTCATCCACTCGTCGACCAGATCGATCCTGGTCCCGTC
GGTGATCCAGTTGCGCTCCTATGTCCGGGTTCCCTACCGTGCCCGGGTTCCGATGACCCGGGCCGCGCTCATGCATCGGG
ACCGGTTCTGTTGTGCCTACTGCGGCGGCAAGGCCGACACCGTCGACCACGTGGTACCCCGCAGCCGGGGCGGTGCCCAC
TCCTGGGAGAACTGCGTTGCGTGCTGCTCGCCGTGTAACCACCGCAAGGGTGACAGGCTGTTGACCGAGCTTGGCTGGGC
ACTCCGCCGGGCGCCGCTGCCGCCCACGGGACCGCACTGGCGACTGCTGTCGGCGGTCAAGGAGCTGGACCCGTCCTGGG
CGCGATACCTCGGTGAGGGTGCGGCCTGA

Upstream 100 bases:

>100_bases
CAGCCAGCCCCCGGTTTGTTCACCGGAGCGACACGGTGTGGACGTGGCATTTGGCGTGCGATTAGCCGCGAATCATGGTG
GACTGTTCGGCGGAGGACCT

Downstream 100 bases:

>100_bases
AAACCCGGTGGGATACGGTTTGCGTCGTGAGTGCTATGGAGATCCACCTCTTCTTTGTCGGTATCCCGTTGTTGCTGGTG
GTTGTGCTGTCTGTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVI
CGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAH
SWENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA

Sequences:

>Translated_222_residues
MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVI
CGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAH
SWENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA
>Mature_221_residues
AHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLLNSTYEPLTALSMRRAIVMVIC
GKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYRARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHS
WENCVACCSPCNHRKGDRLLTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24391; Mature: 24260

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEE
NSTYEPLTALSMRRAIVMVICGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYR
CCCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCC
ARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHSWENCVACCSPCNHRKGDRL
CCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
LTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure 
AHGKKRRGHRSSGVAAGVTGPASCLHGVHSHRLASGVETHPPNRHESASIWNRRRVLLL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEEE
NSTYEPLTALSMRRAIVMVICGKADVVHEDPSGPVIHSSTRSILVPSVIQLRSYVRVPYR
CCCCCHHHHHHHHHHEEEEEECCCCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCCCCC
ARVPMTRAALMHRDRFCCAYCGGKADTVDHVVPRSRGGAHSWENCVACCSPCNHRKGDRL
CCCCHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
LTELGWALRRAPLPPTGPHWRLLSAVKELDPSWARYLGEGAA
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA