| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638351
Identifier: 121638351
GI number: 121638351
Start: 2736814
End: 2737317
Strand: Reverse
Name: 121638351
Synonym: BCG_2488c
Alternate gene names: NA
Gene position: 2737317-2736814 (Counterclockwise)
Preceding gene: 121638352
Following gene: 121638349
Centisome position: 62.57
GC content: 68.65
Gene sequence:
>504_bases ATGACGCATCGGAGTTCACGGTTGGAGGTGGGGCCAGTGGCACGTGGTGACGTTGCGACGATTGAGCACGCCGAGCTGCC GCCGGGTTGGGTGCTGACCACCAGCGGACGGATCTCGGGGGTCACCGAGCCCGGGGAACTGTCCGTGCACTACCCGTTCC CCATCGCAGATCTCGTCGCCCTGGACGACGCGCTGACCTACAGCTCGCGGGCGTGTCAGGTGAGGTTCGCCATCTACCTC GGCGACTTGGGTCGTGACACCGCCGCGCGGGCCCGCGAGATCTTGGGCAAGGTGCCCACGCCGGACAATGCTGTGCTGCT CGCGGTCTCGCCCAACCAGTGCGCCATCGAAGTGGTCTACGGCTCGCAAGTCCGCGGCCGCGGTGCCGAGTCGGCGGCTC CGCTCGGGGTTGCCGCCGCTTCCTCAGCGTTCGAGCAGGGTGAGCTGGTAGATGGGCTGATCAGCGCGATCCGCGTGCTC AGCGCGGGGATCGCGCCGGGCTGA
Upstream 100 bases:
>100_bases CACCCGGCAACCTACAAACTGTCGGAGCCTTGGACACACCCGCCCATCCTGTGGGCCGCCACCGACGAGGTCGTTGGCAG CGCGCACGGCGGACACGGGC
Downstream 100 bases:
>100_bases CCCGGCGAGCACGCCCGAATGTACGCCCGATGCGGCGTGTCGTTGTACAGACACGCGCCCTCGCGGTGAGGGCTAGCCGT CAGCGTCGAAGTTGCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTHRSSRLEVGPVARGDVATIEHAELPPGWVLTTSGRISGVTEPGELSVHYPFPIADLVALDDALTYSSRACQVRFAIYL GDLGRDTAARAREILGKVPTPDNAVLLAVSPNQCAIEVVYGSQVRGRGAESAAPLGVAAASSAFEQGELVDGLISAIRVL SAGIAPG
Sequences:
>Translated_167_residues MTHRSSRLEVGPVARGDVATIEHAELPPGWVLTTSGRISGVTEPGELSVHYPFPIADLVALDDALTYSSRACQVRFAIYL GDLGRDTAARAREILGKVPTPDNAVLLAVSPNQCAIEVVYGSQVRGRGAESAAPLGVAAASSAFEQGELVDGLISAIRVL SAGIAPG >Mature_166_residues THRSSRLEVGPVARGDVATIEHAELPPGWVLTTSGRISGVTEPGELSVHYPFPIADLVALDDALTYSSRACQVRFAIYLG DLGRDTAARAREILGKVPTPDNAVLLAVSPNQCAIEVVYGSQVRGRGAESAAPLGVAAASSAFEQGELVDGLISAIRVLS AGIAPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2468_MYCTU (O53195)
Other databases:
- EMBL: AE000516 - EMBL: BX842579 - PIR: C70866 - RefSeq: NP_216984.1 - RefSeq: NP_337029.1 - EnsemblBacteria: EBMYCT00000000431 - EnsemblBacteria: EBMYCT00000072762 - GeneID: 887767 - GeneID: 925783 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2543 - KEGG: mtu:Rv2468c - TIGR: MT2543 - TubercuList: Rv2468c - GeneTree: EBGT00050000016740 - HOGENOM: HBG480708 - OMA: LFPTTPE - ProtClustDB: CLSK872069
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17289; Mature: 17158
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHRSSRLEVGPVARGDVATIEHAELPPGWVLTTSGRISGVTEPGELSVHYPFPIADLVA CCCCCCCCEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHH LDDALTYSSRACQVRFAIYLGDLGRDTAARAREILGKVPTPDNAVLLAVSPNQCAIEVVY HHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE GSQVRGRGAESAAPLGVAAASSAFEQGELVDGLISAIRVLSAGIAPG CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure THRSSRLEVGPVARGDVATIEHAELPPGWVLTTSGRISGVTEPGELSVHYPFPIADLVA CCCCCCCEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHH LDDALTYSSRACQVRFAIYLGDLGRDTAARAREILGKVPTPDNAVLLAVSPNQCAIEVVY HHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE GSQVRGRGAESAAPLGVAAASSAFEQGELVDGLISAIRVLSAGIAPG CCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036