| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is cbiX [H]
Identifier: 121638272
GI number: 121638272
Start: 2652150
End: 2653049
Strand: Direct
Name: cbiX [H]
Synonym: BCG_2407
Alternate gene names: 121638272
Gene position: 2652150-2653049 (Clockwise)
Preceding gene: 121638271
Following gene: 121638273
Centisome position: 60.63
GC content: 69.44
Gene sequence:
>900_bases GTGACCGCGCCGGCGACGATGCAGAGCGCAGCGATGCTGAGGAGCGGCGCCATCGAAGCACCGCCGGCGACGATGCAGAG CGCAGCGATGCTGAGGAGCGGCGCCATCGAAGCACCGCCGGCGACGATGCAGAGCGCAGCGATGCGGTGGGGGCACCTCC CGCTTGCGGAGGAGAGCGGCACCATCGCGCCTCAGCTCGTCCTCACCGCACACGGCAGCAAAGATCCGCGATCGGCCGCC AACGCACGGGCTATCGCGGGCCGGCTGGCGCGCATGCGGCCCGGGCTCGACGTGCGGGTCGCGTTCTGTGAGCTCAACTC GCCCAACCTGGTCGACGTGCTCAACCGCTGTCGAGGAGCAGCTGTGGTCACCCCGCTGCTGCTGGCCGATGCCTACCATG CTCGCGTCGACATCCCTGCCCAGATCGCCAGCTGCCGCGTTGGTCACCGGGTACGCCAGGCCAGTGTGCTGGGTGAGGAC ATTCGGCTGGTGTCAGCGCTGCATGAGCGCCTCACCGAGCTGGGGGTTTCGCCGTTCGACCACACACTGGGGGTGGTCGT GCTCGCGATCGGCTCATCGCATCCCGCGGCCAATGCGCGCACCTCGACGGTGGCGTCAAGGCTGGCGGAGGGGACCCAGT GGGCCGCGGTGACGACCGCTTTCATCACCCGACCGGAGGCTTCGCTGGCCGATGCCACCGATCGGTTGCGACGCCACGGT GCCCGTCGGATGGTCATCGCGCCATGGCTGCTCGCCCCTGGGATACTGTCTGACCGGGTACGCGGATACGCACGGGAAGC CGGCATCGCGATGGCACAACCGCTGGGTGCACACCCGATGGTGGCCGCGACCATGTGGGATCGCTACCGACAAGCCGTGG CCGGTCGGATCGCGGCCTAG
Upstream 100 bases:
>100_bases TCGGTTGCGCTCCGTGCACAGCCAAACCCGCCGAAGGCGCCGACCCGCGCAGCGGACGCTGGCAGGGGCTGGCCAAGACC GAATGCGGGTTGCACGCCTC
Downstream 100 bases:
>100_bases GTCTTCTCGAAGGTCTGCTGGAACGGATGTCCTCTGGTGAGTGTTTGGTTGCGAGCGGGCGCCTTGGTGGCTGCAGTGAT GCTGTCGCTGAGCGGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: CbiXL [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTAPATMQSAAMLRSGAIEAPPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAA NARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGED IRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHG ARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Sequences:
>Translated_299_residues MTAPATMQSAAMLRSGAIEAPPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAA NARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGED IRLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHG ARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA >Mature_298_residues TAPATMQSAAMLRSGAIEAPPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESGTIAPQLVLTAHGSKDPRSAAN ARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGAAVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDI RLVSALHERLTELGVSPFDHTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHGA RRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA
Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbiX family. CbiXL subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002762 [H]
Pfam domain/function: PF01903 CbiX [H]
EC number: =4.99.1.3 [H]
Molecular weight: Translated: 31566; Mature: 31435
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPATMQSAAMLRSGAIEAPPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESG CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC TIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCH AVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHG HHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC ARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA CCEEEEEHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAPATMQSAAMLRSGAIEAPPATMQSAAMLRSGAIEAPPATMQSAAMRWGHLPLAEESG CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCC TIAPQLVLTAHGSKDPRSAANARAIAGRLARMRPGLDVRVAFCELNSPNLVDVLNRCRGA CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCH AVVTPLLLADAYHARVDIPAQIASCRVGHRVRQASVLGEDIRLVSALHERLTELGVSPFD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH HTLGVVVLAIGSSHPAANARTSTVASRLAEGTQWAAVTTAFITRPEASLADATDRLRRHG HHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC ARRMVIAPWLLAPGILSDRVRGYAREAGIAMAQPLGAHPMVAATMWDRYRQAVAGRIAA CCEEEEEHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9742225; 12917443 [H]