| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638205
Identifier: 121638205
GI number: 121638205
Start: 2568943
End: 2569821
Strand: Reverse
Name: 121638205
Synonym: BCG_2340c
Alternate gene names: NA
Gene position: 2569821-2568943 (Counterclockwise)
Preceding gene: 121638206
Following gene: 121638201
Centisome position: 58.75
GC content: 66.78
Gene sequence:
>879_bases GTGACCATCGTCGTCGGGTATTTGGCTGGCAAGGTCGGTCCGTCCGCATTACATCTAGCCGTCCGCGTCGCGCGGATGCA CAAGACGTCGCTCACAGTGGCCACCATCGTGCGCAGGCACTGGCCGACACCGTCGCTCGCCCGCGTCGACGCCGAGTACG AGCTCTGGTCTGAGCAGCTGGCTGCCGCCTCCGCGCGAGAGGCCCAGCGCTACCTGCGCAGACTGGCCGACGGGATCGAG GTCAGCTACCACCACCGCGCACACCGATCGGTGTCGGCTGGTCTGCTCGACGTCGTCGAGGAACTCGAAGCCGGGGTGCT GGTGCTGGGGTCGTTTCCCAGCGGGCGGCGCGCGCGGGTGTTGATCGGCTCGACCGCCGACCGGCTGCTGCATTCGTCGC CGGTACCGGTGGCGATCACCCCCCGCCGCTACCGTTGCTACACCGACCGGTTGACACGGCTCAGCTGCGGCTACTCCGCG ACGTCGGGTTCGGTCGACGTGGTGAGGCGATGCGGCCACCTGGCCAGCCGGTATGGCGTGCCGATGCGGGTGATCACATT CGCGGTCCGCGGCCGGACCATGTATCCGCCCGAAGTGGGGCTGCATGCCGAGGCTTCGGTTCTGGAGGCATGGGCGGCGC AAGCGCGAGAACTGTTGGAAAAACTAAGAATTAACGGCGTCGTGAGTGAAGACGTTGTGCTGCAAGTGGTCACCGGGAAC GGCTGGGCGCAGGCGCTGGACGCTGCGGACTGGCAGGACGGGGAGATCCTGGCCTTGGGCACCTCGCCGTTCGGTGATGT CGCGAGAGTATTCCTCGGCTCCTGGAGTGGCAAGATCATTCGCTACAGCCCGGTCCCCGTGCTAGTACTACCGGGCTAG
Upstream 100 bases:
>100_bases ACTGGTACACCTGGCTGGCGTTCAGCGGATGGGTGGCGGTGGCAGTGATCTTTTACCTGATGTGGGGTCGGCACCACAGT GCGCTCAACGAGGAAGTGCC
Downstream 100 bases:
>100_bases ATCGCAACTAGCGCTGTGTGGCAGCATTGGCCGCCGCCTGTGCCTGCCTCAGGGTTGTCGTGACATCGCCACGGCCGAGG AACATTTCGTCGAAGTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: USP Rv2319c [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVDAEYELWSEQLAAASAREAQRYLRRLADGIE VSYHHRAHRSVSAGLLDVVEELEAGVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAITPRRYRCYTDRLTRLSCGYSA TSGSVDVVRRCGHLASRYGVPMRVITFAVRGRTMYPPEVGLHAEASVLEAWAAQARELLEKLRINGVVSEDVVLQVVTGN GWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG
Sequences:
>Translated_292_residues MTIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVDAEYELWSEQLAAASAREAQRYLRRLADGIE VSYHHRAHRSVSAGLLDVVEELEAGVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAITPRRYRCYTDRLTRLSCGYSA TSGSVDVVRRCGHLASRYGVPMRVITFAVRGRTMYPPEVGLHAEASVLEAWAAQARELLEKLRINGVVSEDVVLQVVTGN GWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG >Mature_291_residues TIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVDAEYELWSEQLAAASAREAQRYLRRLADGIEV SYHHRAHRSVSAGLLDVVEELEAGVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAITPRRYRCYTDRLTRLSCGYSAT SGSVDVVRRCGHLASRYGVPMRVITFAVRGRTMYPPEVGLHAEASVLEAWAAQARELLEKLRINGVVSEDVVLQVVTGNG WAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 31795; Mature: 31664
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVDAEYELWSEQL CEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH AAASAREAQRYLRRLADGIEVSYHHRAHRSVSAGLLDVVEELEAGVLVLGSFPSGRRARV HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEE LIGSTADRLLHSSPVPVAITPRRYRCYTDRLTRLSCGYSATSGSVDVVRRCGHLASRYGV EECCCHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC PMRVITFAVRGRTMYPPEVGLHAEASVLEAWAAQARELLEKLRINGVVSEDVVLQVVTGN CHHHEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC GWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG CHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCEEEECC >Mature Secondary Structure TIVVGYLAGKVGPSALHLAVRVARMHKTSLTVATIVRRHWPTPSLARVDAEYELWSEQL EEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHH AAASAREAQRYLRRLADGIEVSYHHRAHRSVSAGLLDVVEELEAGVLVLGSFPSGRRARV HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEE LIGSTADRLLHSSPVPVAITPRRYRCYTDRLTRLSCGYSATSGSVDVVRRCGHLASRYGV EECCCHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC PMRVITFAVRGRTMYPPEVGLHAEASVLEAWAAQARELLEKLRINGVVSEDVVLQVVTGN CHHHEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC GWAQALDAADWQDGEILALGTSPFGDVARVFLGSWSGKIIRYSPVPVLVLPG CHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]