| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121638200
Identifier: 121638200
GI number: 121638200
Start: 2563012
End: 2564385
Strand: Reverse
Name: 121638200
Synonym: BCG_2335c
Alternate gene names: NA
Gene position: 2564385-2563012 (Counterclockwise)
Preceding gene: 121638201
Following gene: 121638199
Centisome position: 58.62
GC content: 66.89
Gene sequence:
>1374_bases ATGATCGAGCCGCAGCACGCCGTCAACATCGTTTTAAAGGAAGCGGCCAGGTCTGGCCGGGCGGACGAGACCATGGTGCT GGTCACCGAAAAGGTCGAGGCGACACTGCGTTGGGCGGGCAATTCGATGACCACCAACGGCGTTTCCCACAGCCGAAACG TCACCGTGATTTCGATCGTCCGACGGGGAGATAGCGCCTTCGTCGGCTCCGTGGTCTCCGCCGAAGTGGACCCGTCGGTG CTGCCCGGTCTGGTGGTGTCCTCCCAGGACGCGGCCCGCTCCGCGCCGGAGGCCGGTGATGCCGCGCCGCTGCTTGCCGA TACCGGAGAGCCCGACGACTGGGATGCCCCGGTTCCGGGCACCGGGGCAGGGGTTTTCACCGGTATCGCCGGCTCACTGA GCAGGGGCTTCCGCGGGGCCGACCGCTTGTACGGCTACGCGCACCGCAGTGTGTCCACGACGTTTCTGGCATCGTCGACG GGTCTGCGCCGCCGCTACACCCAGCCCACCGGGGCGATCGAGATCAACGCCAAACGCGGCGACGCCAGCGCTTGGGTGGG GATCGGCACACCCGATTTCGTCGAGGTGCCCATCGATCTGATGCTCGAGCGGCTGTCGACGCGGCTGCGGTGGGCGCAAC GCACCGTCGAGCTGCCGGCCGGGCGCTACCAGACCATCATGCCTCCGTCGACGGTGGCCGACATGATGATCTACCTGGGT TGGTCGATGGCCGGGCGCGGCGCGCAGGAGGGCCGAACCGCTTTCTCGGCTCCTGGCGGTGGAACCCGGGTGGGAGAGCG GTTGACCGAGCTGCCGCTGACGTTGTTCACCGATCCGGCTGCGCCGGGTCTGGCGTGTACGCCGTTTGTGGCGGTGAGCA ACTCCTCGGAGACGCAATCGGTGTTCGACAACGGCATGGAAATCAGCCAGGTGGACTGGATCCGCAGCGGTGTGATCAAT GCGCTGGCGTATCCACGGGCCACTGCCGCCAAATTCGACGCCCCAGTTGCGGTCGCCGCCGACAACTTGATCATGACCGG CGGGTCGGCCGATCTCGCCGACATGATCGCGGGCACCGAGCGCGGACTGTTGCTGACCACGCTGTGGTACATCCGCGAGG TCGACCCGACCACGCTGCTGCTCACCGGGCTGACCCGCGACGGCGTCTACCTGGTCGAAGACGGCGAGGTCAGCGCGGCG GTCAACAACTTCCGGTTTAACGAAAGCCCACTGGACCTGCTGCGACGGGCCACCGAAGCAGGTGTCAGCGAGCCGACACT GCCGCGCGAATGGTCAGATTGGGTTACCCGTACCGCGATGCCGCCGCTGCGGATTCCCGACTTCCACATGTCCTCGGTGA GCCAGGCGCAGTAG
Upstream 100 bases:
>100_bases GCAAGGCCCAGCCCGGCCAGGTTGCCGCGGTCAGCCATGGCTGTCCGTCGGCGTTGTTCCGGGGCGTCAATGTGCTCAAT ACTCGTACTGAAGGTGGTCG
Downstream 100 bases:
>100_bases CGTGTGAAGGGTGCCGGCCCCGGTTTCGGTTCGTGACGATCTGTGTCGGTTGGTGGCGCTATCGCCGGGCGACGGCCGGA TTGCGGGGCTGGTGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: TldD/PmbA Family Protein; CalR5 Protein; Modulator Of DNA Gyrase; TldD Protein; TldD/PmbA Family; LOW QUALITY PROTEIN CalR5 Protein; Modulator Of DNA Gyrase Protein TldD; Zn-Dependent Protease; Microcin-Processing Peptidase PmbA; Zn-Dependent Protease-Like Protein; DNA Gyrase Modulator Family Protein
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSV LPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASST GLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLG WSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQVDWIRSGVIN ALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAA VNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ
Sequences:
>Translated_457_residues MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSV LPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASST GLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLG WSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQVDWIRSGVIN ALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAA VNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ >Mature_457_residues MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSV LPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASST GLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLG WSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQSVFDNGMEISQVDWIRSGVIN ALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAA VNNFRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ
Specific function: Unknown
COG id: COG0312
COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48712; Mature: 48712
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIV CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEEEE RRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPG ECCCCHHHHHHHCCCCCCHHCCCEEECCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC TGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRG CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCEEEEECCC DASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLG CCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHH WSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQS HHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCEEEECCCCCCCEECCEEEECCCCHHHH VFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTE HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCEEEECCCCHHHHHHHCCC RGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEA CCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEHHHCCCCCCCHHHHHHHHHHC GVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIV CCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEEEE RRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEPDDWDAPVPG ECCCCHHHHHHHCCCCCCHHCCCEEECCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC TGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRG CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCEEEEECCC DASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLG CCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHH WSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGLACTPFVAVSNSSETQS HHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCEEEECCCCCCCEECCEEEECCCCHHHH VFDNGMEISQVDWIRSGVINALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTE HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCEEEECCCCHHHHHHHCCC RGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNNFRFNESPLDLLRRATEA CCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEHHHCCCCCCCHHHHHHHHHHC GVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA