Click here to switch to the map view.

The map label for this gene is 121638199

Identifier: 121638199

GI number: 121638199

Start: 2562147

End: 2563001

Strand: Reverse

Name: 121638199

Synonym: BCG_2334c

Alternate gene names: NA

Gene position: 2563001-2562147 (Counterclockwise)

Preceding gene: 121638200

Following gene: 121638194

Centisome position: 58.59

GC content: 64.68

Gene sequence:

>855_bases
GTGCCGGCCCCGGTTTCGGTTCGTGACGATCTGTGTCGGTTGGTGGCGCTATCGCCGGGCGACGGCCGGATTGCGGGGCT
GGTGAGGCAGGTGTGCGCGCGGGCGCTGTCGCTACCGTCGTTGCCGTGTGAGGTTGCGGTGAACGAGCCGGAGTCGCCGG
CCGAGGCCGTCGTTGCCGAGTTCGCCGAGCAGTTCAGCGTCGATGTCTCAGCGATCACCGGCGAGCAGCGATCCCTGCTG
TGGACGCATTTGGGGGAAGACGCTTTCGGTGCGGTTGTGGCGATGTACATCGCCGACTTTGTGCCGCGGGTGCGCGCCGG
GTTGGAAGCATTGGGCGTCGGCAAGGAGTATCTGGGCTGGGTAACCGGGCCGATCTCCTGGGATCACAACACCGATCTGT
CCGCTGCGGTGTTCAACGGATTTCTGCCGGCGGTGGCCCGGATGCGGGCACTGGACCCGGTCACCTCTGAGCTGGTGCGG
CTGCGTGGAGCTGCGCAGCACAATTGCCGGGTGTGCAAGTCGTTGCGGGAGGTCTCCGCGCTTGATGCGGGCGGTTCGGA
GACGTTGTATGGCGAGATCGAGCGTTTCGATACCTCGGTCTTGCTCGACGTTCGCGCAAAAGCCGCCCTGAGGTATGCAG
ATGCGTTAATTTGGACCCCTGCGCACCTCGCCGTCGACGTTGCCGTCGAGGTGCGCTCCCGGTTCTCGGACGACGAGGCC
GTCGAGCTGACCTTTGACATCATGCGCAACGCCAGCAACAAGGTTGCAGTGTCGTTGGGTGCTGATGCGCCCAGGGTGCA
GCAGGGCACCGAACGGTATCGCATTGGGCTTGACGGTCAGACGGTGTTCGGTTGA

Upstream 100 bases:

>100_bases
CGCGAATGGTCAGATTGGGTTACCCGTACCGCGATGCCGCCGCTGCGGATTCCCGACTTCCACATGTCCTCGGTGAGCCA
GGCGCAGTAGCGTGTGAAGG

Downstream 100 bases:

>100_bases
CGGCGGTCTGGCAGCTCCGCGACGCTGTGGTTCGTATACGTTGACTGATGTAGGGCCAGGTCAGCGCGCCAGGTACCGTC
GAGGCGTGTCGTTTCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAEFAEQFSVDVSAITGEQRSLL
WTHLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNGFLPAVARMRALDPVTSELVR
LRGAAQHNCRVCKSLREVSALDAGGSETLYGEIERFDTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEA
VELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG

Sequences:

>Translated_284_residues
MPAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAEFAEQFSVDVSAITGEQRSLL
WTHLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNGFLPAVARMRALDPVTSELVR
LRGAAQHNCRVCKSLREVSALDAGGSETLYGEIERFDTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEA
VELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG
>Mature_283_residues
PAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAEFAEQFSVDVSAITGEQRSLLW
THLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGWVTGPISWDHNTDLSAAVFNGFLPAVARMRALDPVTSELVRL
RGAAQHNCRVCKSLREVSALDAGGSETLYGEIERFDTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEAV
ELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli ynjA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2313_MYCTU (P64993)

Other databases:

- EMBL:   BX842579
- EMBL:   AE000516
- PIR:   B70703
- RefSeq:   NP_216829.1
- RefSeq:   NP_336855.1
- ProteinModelPortal:   P64993
- SMR:   P64993
- EnsemblBacteria:   EBMYCT00000003775
- EnsemblBacteria:   EBMYCT00000069389
- GeneID:   885268
- GeneID:   924036
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT2376
- KEGG:   mtu:Rv2313c
- TIGR:   MT2376
- TubercuList:   Rv2313c
- GeneTree:   EBGT00050000015676
- HOGENOM:   HBG565243
- OMA:   FIADFVP
- ProtClustDB:   CLSK791774

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30523; Mature: 30392

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAE
CCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHH
FAEQFSVDVSAITGEQRSLLWTHLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGW
HHHHHCCCHHEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VTGPISWDHNTDLSAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCRVCKSLREVSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LDAGGSETLYGEIERFDTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEA
HCCCCCCHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
VELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG
HHHHHHHHHCCCCEEEEEECCCCCHHHCCCHHEEECCCCCCCCC
>Mature Secondary Structure 
PAPVSVRDDLCRLVALSPGDGRIAGLVRQVCARALSLPSLPCEVAVNEPESPAEAVVAE
CCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHH
FAEQFSVDVSAITGEQRSLLWTHLGEDAFGAVVAMYIADFVPRVRAGLEALGVGKEYLGW
HHHHHCCCHHEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VTGPISWDHNTDLSAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCRVCKSLREVSA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LDAGGSETLYGEIERFDTSVLLDVRAKAALRYADALIWTPAHLAVDVAVEVRSRFSDDEA
HCCCCCCHHHHHHHHHCHHHEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
VELTFDIMRNASNKVAVSLGADAPRVQQGTERYRIGLDGQTVFG
HHHHHHHHHCCCCEEEEEECCCCCHHHCCCHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036