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The map label for this gene is xerC [H]

Identifier: 121638194

GI number: 121638194

Start: 2558938

End: 2559393

Strand: Reverse

Name: xerC [H]

Synonym: BCG_2329c

Alternate gene names: 121638194

Gene position: 2559393-2558938 (Counterclockwise)

Preceding gene: 121638199

Following gene: 121638192

Centisome position: 58.51

GC content: 63.82

Gene sequence:

>456_bases
GTGACCGGCGCCGGGATTGTCGAGACGACGACCAACCGGGTGCGTCACGTGCCTGTCCCCGAGCCGGTATCGGAGCGCCT
GCGTGATGAACTGCCAACCGAGCCCAATGCCCTCGTGTTCCCAAGCTACCGCGGCGGGCACCTACCTATCGAGGAGTACC
GCAGAGCCTTCGACAAGGGATGCAAGGCGGTTGGCATTGCCGACCTGGTCCCGCACGGGCTGAGGCACACCACGGCGTCG
CTGGCGATCAGTGCGGGCGCTAATGTCAAAGTCGTGCAGAGGCTTCTCGGACACGCCACAGCGGCCATGACCTTGGACCG
CCATGGCCACCTGCTCAGCGACGACCTGGCGGGCGTGGCAGGTTTGCTTGTGCAGGCCATCAAGAGTGCTGCGGCATCAC
TGCGGTATTCCGACCCTGATTCAGTCGCGGTGGAGAACATATCTGCAGCTAGTTAG

Upstream 100 bases:

>100_bases
CTGACCCTGGTTCTCGGCTACTGCGGACTGCGCTTCGGCGAGGCAGCGGCCCTGCGTCGCAAGAACGTGGGGACCGGGAG
TTGACGATTCGCTCATCTGT

Downstream 100 bases:

>100_bases
CACAAGGGGCGGTAGCTCAGTTGGTTAGAGCCGCGGACTCATAATCCGTTGGTCGCGGGTTCGAGCCCCGCCCGCCCCAC
ATTTCGGACACGTTGATGCG

Product: putative integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTGAGIVETTTNRVRHVPVPEPVSERLRDELPTEPNALVFPSYRGGHLPIEEYRRAFDKGCKAVGIADLVPHGLRHTTAS
LAISAGANVKVVQRLLGHATAAMTLDRHGHLLSDDLAGVAGLLVQAIKSAAASLRYSDPDSVAVENISAAS

Sequences:

>Translated_151_residues
MTGAGIVETTTNRVRHVPVPEPVSERLRDELPTEPNALVFPSYRGGHLPIEEYRRAFDKGCKAVGIADLVPHGLRHTTAS
LAISAGANVKVVQRLLGHATAAMTLDRHGHLLSDDLAGVAGLLVQAIKSAAASLRYSDPDSVAVENISAAS
>Mature_150_residues
TGAGIVETTTNRVRHVPVPEPVSERLRDELPTEPNALVFPSYRGGHLPIEEYRRAFDKGCKAVGIADLVPHGLRHTTASL
AISAGANVKVVQRLLGHATAAMTLDRHGHLLSDDLAGVAGLLVQAIKSAAASLRYSDPDSVAVENISAAS

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 15920; Mature: 15789

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAGIVETTTNRVRHVPVPEPVSERLRDELPTEPNALVFPSYRGGHLPIEEYRRAFDKG
CCCCCCEECCCCCEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHC
CKAVGIADLVPHGLRHTTASLAISAGANVKVVQRLLGHATAAMTLDRHGHLLSDDLAGVA
CCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GLLVQAIKSAAASLRYSDPDSVAVENISAAS
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
TGAGIVETTTNRVRHVPVPEPVSERLRDELPTEPNALVFPSYRGGHLPIEEYRRAFDKG
CCCCCEECCCCCEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHC
CKAVGIADLVPHGLRHTTASLAISAGANVKVVQRLLGHATAAMTLDRHGHLLSDDLAGVA
CCCCCHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GLLVQAIKSAAASLRYSDPDSVAVENISAAS
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]