| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is lppE
Identifier: 121637785
GI number: 121637785
Start: 2132867
End: 2133289
Strand: Reverse
Name: lppE
Synonym: BCG_1918c
Alternate gene names: NA
Gene position: 2133289-2132867 (Counterclockwise)
Preceding gene: 121637786
Following gene: 121637784
Centisome position: 48.77
GC content: 61.23
Gene sequence:
>423_bases GTGTGCAATCGGTTGGTCACAGTGACCGGAGTTGCAATGGTCGTCGCGGCTGGTCTCTCCGCGTGCGGGCAAGCTCAGAC GGTACCCCGAAAAGCCGCACGCCTGACTATTGACGGCGTCACTCACACGACACGTCCCGCAACATGCAGCCAGGAGCACT CCTACCGGACCATCGACATCCGCAACCACGACAGCACCGTCCAAGCCGTGGTATTGCTCAGCGGTGACAGGGTAATCCCG CAGTGGGTGAAGATCCGTAACGTCGACGGGTTCAACGGCAGCTTCTGGCACGGCGGGGTGGGCAACGCCCGCGCCGACCG CGCCCGCAACACATACACAGTTGCCGGCAGTGCCTACGGCATCAGCAGCAAAAAACCCAACACGGTGGTGTCAACAGACT TCAACATCCTCGCCGAATGTTGA
Upstream 100 bases:
>100_bases GAGTTCGTCCGACGTCACATTGCCAAGTCCCTGGCCACGTTGGAGCCAAAACGGAAGTAATGTCCCGAGCACAATGCTCA GGCCCGAATGGAGGTGGCTG
Downstream 100 bases:
>100_bases ATTGCGGGTTCTAGTCTTGAAGAAAAGCCACTCGATCGACGGAGGCGCGGTGAAGGACAAGCTGCACTGGTTGGCGATGC ACGGGGTGATCCGCGGCATT
Product: putative lipoprotein lppE
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MCNRLVTVTGVAMVVAAGLSACGQAQTVPRKAARLTIDGVTHTTRPATCSQEHSYRTIDIRNHDSTVQAVVLLSGDRVIP QWVKIRNVDGFNGSFWHGGVGNARADRARNTYTVAGSAYGISSKKPNTVVSTDFNILAEC
Sequences:
>Translated_140_residues MCNRLVTVTGVAMVVAAGLSACGQAQTVPRKAARLTIDGVTHTTRPATCSQEHSYRTIDIRNHDSTVQAVVLLSGDRVIP QWVKIRNVDGFNGSFWHGGVGNARADRARNTYTVAGSAYGISSKKPNTVVSTDFNILAEC >Mature_140_residues MCNRLVTVTGVAMVVAAGLSACGQAQTVPRKAARLTIDGVTHTTRPATCSQEHSYRTIDIRNHDSTVQAVVLLSGDRVIP QWVKIRNVDGFNGSFWHGGVGNARADRARNTYTVAGSAYGISSKKPNTVVSTDFNILAEC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14975; Mature: 14975
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNRLVTVTGVAMVVAAGLSACGQAQTVPRKAARLTIDGVTHTTRPATCSQEHSYRTIDI CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE RNHDSTVQAVVLLSGDRVIPQWVKIRNVDGFNGSFWHGGVGNARADRARNTYTVAGSAYG CCCCCCEEEEEEEECCEECCCEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCEEC ISSKKPNTVVSTDFNILAEC CCCCCCCEEEECCCEEEECC >Mature Secondary Structure MCNRLVTVTGVAMVVAAGLSACGQAQTVPRKAARLTIDGVTHTTRPATCSQEHSYRTIDI CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEE RNHDSTVQAVVLLSGDRVIPQWVKIRNVDGFNGSFWHGGVGNARADRARNTYTVAGSAYG CCCCCCEEEEEEEECCEECCCEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCEEC ISSKKPNTVVSTDFNILAEC CCCCCCCEEEECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA