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The map label for this gene is ybeX [C]

Identifier: 121637745

GI number: 121637745

Start: 2091684

End: 2093051

Strand: Reverse

Name: ybeX [C]

Synonym: BCG_1878c

Alternate gene names: 121637745

Gene position: 2093051-2091684 (Counterclockwise)

Preceding gene: 121637746

Following gene: 121637744

Centisome position: 47.85

GC content: 67.32

Gene sequence:

>1368_bases
GTGAACCTCACCGATACCGTCGCCACCATCCTGGCGATCTTGGCGCTCACCGCAGGCACGGGGGTGTTCGTCGCGGCCGA
ATTCTCGCTGACCGCGCTGGACCGCAGCACCGTGGAGGCCAACGCCCGCGGCGGCACCAGTCGGGACCGCTTCATCCAGC
GCGCACACCACCGGCTGTCGTTCCAGCTTTCGGGTGCTCAGTTGGGTATCTCGATCACCACCTTGGCTACCGGCTACCTG
ACCGAACCGCTGGTGGCCGAGCTACCGCATCCTGGGCTGGTCGCAGTCGGAATGTCTGATCGGGTGGCCGACGGTCTTAT
CACGTTTTTTGCCCTGGTGATCGTGACATCGCTGTCGATGGTCTTCGGCGAGCTGGTCCCCAAGTATCTCGCGGTGGCGC
GCCCGCTGCGCACCGCGCGCTCAGTCGTGGCCGGCCAGGTGCTGTTCTCACTGCTGCTCACCCCGGCCATCCGTCTCACG
AACGGAGCGGCGAACTGGATCGTGCGTCGACTTGGCATCGAGCCGGCCGAGGAGCTGCGCTCAGCTCGCACACCGCAGGA
GCTGGTGTCGTTGGTGCGTAGTTCCGCGCGCAGCGGCGCACTCGATGACGCCACGGCGTGGCTGATGCGCCGCTCGCTGC
AGTTCGGCGCCCTGACGGCCGAGGAGCTGATGACGCCACGGTCGAAGATCGTGGCGCTGCAGACCGATGACACCATCGCC
GACCTGGTTGCGGCCGCGGCCGCATCGGGATTCTCGCGCTTCCCGGTGGTCGAGGGAGATCTCGATGCGACCGTCGGCAT
CGTGCACGTCAAGCAGGTGTTCGAGGTTCCGCCCGGCGATCGCGCGCACACGCTGCTAACGACGGTCGCCGAGCCGGTCG
CGGTGGTGCCCTCGACGCTCGACGGCGATGCGGTGATGGCGCAGGTCCGCGCCAGTGCGCTACAGACCGCCATGGTTGTG
GACGAGTACGGCGGCACCGCGGGCATGGTAACCCTGGAGGACTTGATCGAAGAGATCGTGGGCGACGTCCGCGACGAACA
CGACGATGCGACACCGGATGTGGTGGCAGCCGGCAACGGATGGCGGGTCTCGGGTCTGCTACGCATCGACGAGGTGGCCA
GCGCCACCGGCTATCGAGCCCCCGACGGTCCGTACGAGACGATCGGCGGGTTGGTGCTTCGAGAGCTCGGCCACATCCCG
GTGGCCGGCGAAACGGTCGAGCTGACTGCCTTGGACCAGGACGGACTTCCCGACGACTCGATGCGGTGGTTAGCCACCGT
GATCCAGATGGACGGGCGCCGGATCGACTCGTTGGAGTTGATCAAAATGGGCGGCCATGCCGACCCCGGGTCGGGGCGGG
GCCGCTGA

Upstream 100 bases:

>100_bases
AAAGGGATGACGTGCCGCGGGCACCCGTCCACACCGTCGGTTTTCCAGGCGAGCGGCCGGTACTGGCTCGGCCCGATATA
GCGCGACGACCGAGCCGCCC

Downstream 100 bases:

>100_bases
TGGATGTGCTGTCCGCGGTGTTGCTGGCGCTTTTGCTGATCGGCGCCAACGCGTTCTTCGTGGGCGCGGAATTCGCGTTG
ATCTCGGCGCGTCGTGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQLSGAQLGISITTLATGYL
TEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSMVFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLT
NGAANWIVRRLGIEPAEELRSARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIA
DLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLDGDAVMAQVRASALQTAMVV
DEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNGWRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIP
VAGETVELTALDQDGLPDDSMRWLATVIQMDGRRIDSLELIKMGGHADPGSGRGR

Sequences:

>Translated_455_residues
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQLSGAQLGISITTLATGYL
TEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSMVFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLT
NGAANWIVRRLGIEPAEELRSARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIA
DLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLDGDAVMAQVRASALQTAMVV
DEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNGWRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIP
VAGETVELTALDQDGLPDDSMRWLATVIQMDGRRIDSLELIKMGGHADPGSGRGR
>Mature_455_residues
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQLSGAQLGISITTLATGYL
TEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSMVFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLT
NGAANWIVRRLGIEPAEELRSARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIA
DLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLDGDAVMAQVRASALQTAMVV
DEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNGWRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIP
VAGETVELTALDQDGLPDDSMRWLATVIQMDGRRIDSLELIKMGGHADPGSGRGR

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=403, Percent_Identity=28.287841191067, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI94681046, Length=350, Percent_Identity=22.5714285714286, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786879, Length=228, Percent_Identity=29.8245614035088, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI145693175, Length=319, Percent_Identity=24.4514106583072, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1790664, Length=443, Percent_Identity=22.3476297968397, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788119, Length=247, Percent_Identity=26.7206477732794, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082033, Length=388, Percent_Identity=22.9381443298969, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48099; Mature: 48099

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHEE
FQLSGAQLGISITTLATGYLTEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSM
EEECCCEECEEEEHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
VFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLTNGAANWIVRRLGIEPAEELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
SARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIA
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEEECCCHHH
DLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTL
HHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCC
DGDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCC
WRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIPVAGETVELTALDQDGLPDDS
EEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHH
MRWLATVIQMDGRRIDSLELIKMGGHADPGSGRGR
HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNLTDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLS
CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHEE
FQLSGAQLGISITTLATGYLTEPLVAELPHPGLVAVGMSDRVADGLITFFALVIVTSLSM
EEECCCEECEEEEHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
VFGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLTNGAANWIVRRLGIEPAEELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
SARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIA
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHEEEEECCCHHH
DLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTL
HHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCC
DGDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCC
WRVSGLLRIDEVASATGYRAPDGPYETIGGLVLRELGHIPVAGETVELTALDQDGLPDDS
EEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHH
MRWLATVIQMDGRRIDSLELIKMGGHADPGSGRGR
HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]