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The map label for this gene is PE_PGRS34a [H]

Identifier: 121637743

GI number: 121637743

Start: 2089654

End: 2090472

Strand: Reverse

Name: PE_PGRS34a [H]

Synonym: BCG_1876c

Alternate gene names: 121637743

Gene position: 2090472-2089654 (Counterclockwise)

Preceding gene: 121637744

Following gene: 121637742

Centisome position: 47.79

GC content: 75.58

Gene sequence:

>819_bases
ATGTCGTTTGTGGTGGCGGCCCCAGAAGTGGTGGTGGCGGCGGCGTCGGATTTGGCCGGCATCGGGTCGGCGATCGGCGC
GGCGAATGCGGCTGCGGCCGTGCCCACGATGGGGGTGCTGGCCGCGGGCGCCGATGAGGTGTCGGCGGCTGTTGCGGATT
TGTTCGGCGCGCACGCCCAGGCCTATCAGGCATTGAGTGCGCAGGCGGCGCTGTTTCACGAGCAGTTTGTGCATGCCATG
ACCGCCGGCGCGGGGGCCTATGCCGGTGCCGAGGCGGCGGACGCCGCCGCGCTGGACGTGCTCAACGGGCCGTTTCAGGC
GTTGTTCGGCCGCCCGTTGATCGGTGATGGCGCCAATGGCGCGCCGGGACAGCCCGGCGGGCCCGGCGGGTTGCTGTACG
GCAACGGCGGCAACGGCGGCAACGGCGGGATCGGCCAGCCCGGCGGCGCCGGTGGGGATGCAGGGTTGATCGGCAACGGC
GGCAACGGTGGCATCGGCGGGCCGGGGCGACCGGCCTTGCCGGTGGTGCCGGCGGGGTCGGCGGACTGCTCTTCGGCGAC
GGCGGCAACGGCGGTGCCGGCGGACTCGGTACCGGACCCGTCGGCGCTACCGGTGGGATCGGCGGGCCCGGTGGAGCCGC
CGTCGGGCTGTTCGGCCATGGCGGGGCCGGCGGGGCCGGCGGGCTCGGCAAGGCCGGCTTCGCGGGCGGGGCCGGCGGCA
CCGGCGGCACCGGCGGACTGCTGTACGGCAACGGCGGCAACGGCGGCAATGTCCCATCGGGAGCCGCCGACGGCGGAGCG
GGCGGTGACGCCCGGCTGA

Upstream 100 bases:

>100_bases
ATCGTTTCGGATCAGTTGGCCCGAACGCCGGACGTGGTGGCGGGACGTCAATACGCTGTAACCGCTGGGACTGCGCACCC
GGTCCCGTGAGGAGCGCGTC

Downstream 100 bases:

>100_bases
TCGGCAACGGGGGCGACGGCGGCTCCGTCGGTGCCGCCCCCACCGGCATCGGCAACGGCGGCAACGGCGGCAACGGCGGG
TGGCTGTACGGCGACGGCGG

Product: PE-PGRS family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQFVHAM
TAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANGAPGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNG
GNGGIGGPGRPALPVVPAGSADCSSATAATAVPADSVPDPSALPVGSAGPVEPPSGCSAMAGPAGPAGSARPASRAGPAA
PAAPADCCTATAATAAMSHREPPTAERAVTPG

Sequences:

>Translated_272_residues
MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQFVHAM
TAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANGAPGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNG
GNGGIGGPGRPALPVVPAGSADCSSATAATAVPADSVPDPSALPVGSAGPVEPPSGCSAMAGPAGPAGSARPASRAGPAA
PAAPADCCTATAATAAMSHREPPTAERAVTPG
>Mature_271_residues
SFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQAYQALSAQAALFHEQFVHAMT
AGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANGAPGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGG
NGGIGGPGRPALPVVPAGSADCSSATAATAVPADSVPDPSALPVGSAGPVEPPSGCSAMAGPAGPAGSARPASRAGPAAP
AAPADCCTATAATAAMSHREPPTAERAVTPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000084 [H]

Pfam domain/function: PF00934 PE [H]

EC number: NA

Molecular weight: Translated: 24837; Mature: 24705

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ
CCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC
APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGRPALPVVPAGS
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCC
ADCSSATAATAVPADSVPDPSALPVGSAGPVEPPSGCSAMAGPAGPAGSARPASRAGPAA
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAPADCCTATAATAAMSHREPPTAERAVTPG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFVVAAPEVVVAAASDLAGIGSAIGAANAAAAVPTMGVLAAGADEVSAAVADLFGAHAQ
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AYQALSAQAALFHEQFVHAMTAGAGAYAGAEAADAAALDVLNGPFQALFGRPLIGDGANG
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCC
APGQPGGPGGLLYGNGGNGGNGGIGQPGGAGGDAGLIGNGGNGGIGGPGRPALPVVPAGS
CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCC
ADCSSATAATAVPADSVPDPSALPVGSAGPVEPPSGCSAMAGPAGPAGSARPASRAGPAA
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PAAPADCCTATAATAAMSHREPPTAERAVTPG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]