| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is sugA [C]
Identifier: 121637165
GI number: 121637165
Start: 1408649
End: 1409572
Strand: Direct
Name: sugA [C]
Synonym: BCG_1296
Alternate gene names: 121637165
Gene position: 1408649-1409572 (Clockwise)
Preceding gene: 121637164
Following gene: 121637166
Centisome position: 32.2
GC content: 62.55
Gene sequence:
>924_bases GTGACCTCCGTTGAACAGCGGACCGCCACCGCGGTCTTTTCCCGTACCGGGAGCCGCATGGCCGAACGGCGACTGGCGTT CATGCTGGTCGCACCCGCCGCGATGTTGATGGTGGCGGTGACGGCCTATCCCATCGGTTACGCGCTGTGGCTTAGCCTGC AGCGCAACAACCTGGCCACCCCGAACGACACCGCGTTCATCGGGCTGGGCAACTATCACACGATCCTGATCGACCGGTAT TGGTGGACGGCGCTGGCGGTGACGCTGGCGATCACGGCGGTTTCGGTGACGATCGAATTCGTCTTGGGGTTAGCGCTCGC CCTGGTAATGCACCGCACGCTGATCGGCAAGGGGTTGGTGCGCACCGCGGTGCTCATTCCGTACGGCATCGTCACGGTGG TCGCCTCGTATAGCTGGTACTACGCCTGGACGCCGGGCACCGGGTATCTGGCCAACCTGCTGCCGTATGACAGTGCGCCA CTGACGCAACAGATCCCGTCGTTGGGCATCGTGGTGATCGCCGAGGTCTGGAAGACGACGCCGTTTATGTCGCTGCTGCT TTTGGCCGGGTTGGCGCTGGTCCCCGAGGATCTGCTAAGAGCAGCGCAGGTTGACGGCGCCAGCGCCTGGCGGCGGTTGA CGAAGGTCATCTTGCCGATGATCAAGCCGGCGATCGTGGTTGCTCTGCTCTTCAGGACCCTGGACGCTTTCCGGATTTTC GACAACATCTATGTGCTGACCGGCGGCAGCAACAACACCGGATCGGTGTCGATCTTGGGCTACGACAACCTGTTCAAGGG GTTCAACGTGGGCCTTGGTTCGGCGATCAGCGTGCTGATCTTTGGCTGCGTGGCCGTCATTGCGTTCATTTTCATCAAGT TGTTCGGCGCCGCGGCGCCCGGGGGTGAGCCAAGTGGGCGTTGA
Upstream 100 bases:
>100_bases CGGCGGTGCTGAGCCCGATCACCGAGATCGACCCGGAGTCCACGGCCGACGAACTTGCCGCGCAGGCGCAGAAAGCCATC GACGGCATGGGCCTGCTCCC
Downstream 100 bases:
>100_bases ACGGGTGGGCGCGCGGCGCGCCACGTATTGGGCCGTCCTGGACACTTTGGTCGTGGGGTACGCGTTGCTCCCGGTGCTGT GGATTTTCAGCCTGTCACTC
Product: putative sugar-transport integral membrane protein ABC transporter sugA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MTSVEQRTATAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRY WWTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDSAP LTQQIPSLGIVVIAEVWKTTPFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIF DNIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKLFGAAAPGGEPSGR
Sequences:
>Translated_307_residues MTSVEQRTATAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRY WWTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDSAP LTQQIPSLGIVVIAEVWKTTPFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIF DNIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKLFGAAAPGGEPSGR >Mature_306_residues TSVEQRTATAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYW WTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDSAPL TQQIPSLGIVVIAEVWKTTPFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFD NIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKLFGAAAPGGEPSGR
Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=31.4741035856574, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789861, Length=274, Percent_Identity=28.8321167883212, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1790465, Length=228, Percent_Identity=25, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33051; Mature: 32920
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVEQRTATAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC PNDTAFIGLGNYHTILIDRYWWTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLV CCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTAVLIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDSAPLTQQIPSLGIVVIAEVWKTT HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCC PFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIF HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKLFGAAAP CCEEEEECCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGEPSGR CCCCCCC >Mature Secondary Structure TSVEQRTATAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC PNDTAFIGLGNYHTILIDRYWWTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLV CCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTAVLIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDSAPLTQQIPSLGIVVIAEVWKTT HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCC PFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIF HHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DNIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKLFGAAAP CCEEEEECCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGEPSGR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]