| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is lpqY [C]
Identifier: 121637164
GI number: 121637164
Start: 1407246
End: 1408652
Strand: Direct
Name: lpqY [C]
Synonym: BCG_1295
Alternate gene names: 121637164
Gene position: 1407246-1408652 (Clockwise)
Preceding gene: 121637163
Following gene: 121637165
Centisome position: 32.17
GC content: 66.1
Gene sequence:
>1407_bases GTGGTCATGAGTCGCGGGCGGATACCGAGGCTGGGCGCTGCCGTACTGGTGGCGTTGACGACCGCGGCGGCGGCGTGCGG GGCCGATAGCCAGGGGCTGGTGGTCAGCTTCTACACACCGGCCACCGACGGCGCGACGTTCACCGCAATTGCCCAACGCT GCAACCAACAGTTCGGCGGCCGGTTCACCATTGCGCAGGTCAGCTTGCCCAGGTCCCCCAATGAGCAACGGTTACAGCTG GCCCGACGGTTGACCGGTAACGACCGCACCCTGGACGTCATGGCGCTGGATGTGGTGTGGACGGCGGAGTTCGCCGAAGC GGGGTGGGCGCTGCCGCTGTCGGACGACCCAGCGGGGCTGGCCGAGAACGACGCCGTCGCCGATACCCTGCCAGGCCCGC TTGCGACGGCCGGCTGGAACCACAAGCTGTACGCGGCACCCGTCACCACTAATACTCAATTGCTTTGGTACCGACCAGAT TTGGTAAATAGCCCGCCAACGGATTGGAATGCCATGATCGCTGAGGCGGCCCGGCTGCACGCGGCGGGCGAGCCTAGCTG GATCGCGGTACAGGCCAATCAGGGCGAGGGCTTAGTGGTGTGGTTCAACACGCTGCTGGTGAGCGCTGGTGGATCGGTGC TCTCCGAGGACGGCCGGCACGTCACCTTGACCGATACTCCCGCACACCGAGCGGCTACGGTCAGCGCGCTACAGATCCTC AAATCGGTGGCTACCACGCCCGGCGCCGACCCCTCGATCACCCGCACCGAAGAGGGCAGCGCGCGGTTGGCCTTCGAACA GGGCAAGGCCGCGCTCGAGGTCAATTGGCCGTTCGTGTTTGCGTCCATGCTCGAGAACGCGGTGAAGGGTGGTGTGCCCT TCTTACCGCTTAACCGGATTCCGCAGTTGGCCGGCAGCATCAACGACATCGGGACGTTCACGCCCAGCGACGAGCAGTTC CGCATCGCGTATGACGCCAGCCAGCAGGTGTTCGGTTTCGCGCCCTATCCGGCTGTAGCGCCCGGCCAGCCAGCCAAGGT GACGATCGGCGGGTTGAACCTGGCGGTGGCCAAGACGACCCGCCATCGAGCGGAGGCATTCGAAGCGGTGCGTTGTCTGC GTGACCAGCACAATCAGAGGTACGTCTCGCTCGAGGGGGGTCTGCCCGCGGTGCGGGCGTCGCTGTACTCCGATCCGCAA TTCCAGGCGAAGTATCCGATGCACGCCATTATTCGGCAGCAACTCACCGATGCCGCGGTGCGGCCGGCGACGCCGGTGTA CCAGGCGTTGTCCATCCGGCTCGCGGCGGTGCTGAGCCCGATCACCGAGATCGACCCGGAGTCCACGGCCGACGAACTTG CCGCGCAGGCGCAGAAAGCCATCGACGGCATGGGCCTGCTCCCGTGA
Upstream 100 bases:
>100_bases TTGCCGGTCGCTACGACGTACTTTGTGATCCGCAAAATGCGGAAAAGGCACGGGATCTGCTGGCGCGTCTGGCGATCTGA AGCCCGGACGAGAGGCAAAT
Downstream 100 bases:
>100_bases CCTCCGTTGAACAGCGGACCGCCACCGCGGTCTTTTCCCGTACCGGGAGCCGCATGGCCGAACGGCGACTGGCGTTCATG CTGGTCGCACCCGCCGCGAT
Product: putative sugar-binding lipoprotein lpqY
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein; Twin-Arginine Translocation Pathway Signal; ABC Sugar Transporter; Trehalosemaltose ABC Transporter; Sugar ABC Transporter; ABC Transporter
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGGRFTIAQVSLPRSPNEQRLQL ARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGLAENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPD LVNSPPTDWNAMIAEAARLHAAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRIPQLAGSINDIGTFTPSDEQF RIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTTRHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQ FQAKYPMHAIIRQQLTDAAVRPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP
Sequences:
>Translated_468_residues MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGGRFTIAQVSLPRSPNEQRLQL ARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGLAENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPD LVNSPPTDWNAMIAEAARLHAAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRIPQLAGSINDIGTFTPSDEQF RIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTTRHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQ FQAKYPMHAIIRQQLTDAAVRPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP >Mature_468_residues MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGGRFTIAQVSLPRSPNEQRLQL ARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGLAENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPD LVNSPPTDWNAMIAEAARLHAAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRIPQLAGSINDIGTFTPSDEQF RIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTTRHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQ FQAKYPMHAIIRQQLTDAAVRPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP
Specific function: Involved In The High-Affinity Maltose Membrane Transport System Malefgk. Initial Receptor For The Active Transport Of And Chemotaxis Toward Maltooligosaccharides. [C]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49794; Mature: 49794
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGG CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC RFTIAQVSLPRSPNEQRLQLARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGL EEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEHHHHCCCCCCCCCCCCCC AENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPDLVNSPPTDWNAMIAEAARLH CCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH AAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL CCCCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRI HHHHCCCCCCCCCEECCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHH PQLAGSINDIGTFTPSDEQFRIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTT HHHHCCCHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEHHH RHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQFQAKYPMHAIIRQQLTDAAV HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC RPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVMSRGRIPRLGAAVLVALTTAAAACGADSQGLVVSFYTPATDGATFTAIAQRCNQQFGG CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCC RFTIAQVSLPRSPNEQRLQLARRLTGNDRTLDVMALDVVWTAEFAEAGWALPLSDDPAGL EEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEEHHHHCCCCCCCCCCCCCC AENDAVADTLPGPLATAGWNHKLYAAPVTTNTQLLWYRPDLVNSPPTDWNAMIAEAARLH CCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH AAGEPSWIAVQANQGEGLVVWFNTLLVSAGGSVLSEDGRHVTLTDTPAHRAATVSALQIL CCCCCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH KSVATTPGADPSITRTEEGSARLAFEQGKAALEVNWPFVFASMLENAVKGGVPFLPLNRI HHHHCCCCCCCCCEECCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHH PQLAGSINDIGTFTPSDEQFRIAYDASQQVFGFAPYPAVAPGQPAKVTIGGLNLAVAKTT HHHHCCCHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEECCEEEEEHHH RHRAEAFEAVRCLRDQHNQRYVSLEGGLPAVRASLYSDPQFQAKYPMHAIIRQQLTDAAV HHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC RPATPVYQALSIRLAAVLSPITEIDPESTADELAAQAQKAIDGMGLLP CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA