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The map label for this gene is lpqU

Identifier: 121636951

GI number: 121636951

Start: 1174221

End: 1174952

Strand: Direct

Name: lpqU

Synonym: BCG_1079

Alternate gene names: NA

Gene position: 1174221-1174952 (Clockwise)

Preceding gene: 121636950

Following gene: 121636952

Centisome position: 26.84

GC content: 67.62

Gene sequence:

>732_bases
GTGTCGCCGAGACGCTGGTTGCGGGCGGTCGCCGTGATAGGGGCGACCGCGATGCTGTTGGCGTCGAGCTGCACTTGGCA
GCTGAGCCTTTTCATCCCCGACGGCGTGCCGCCTCCGCCCGGCGATCCGGTGCCGCCGGTGGATACGCACGCCGGCGGCC
GGCCCGCGGATCAGTTGCGCGAATGGGCGGAGAAACGTGCTGCGGCATTGGGAATTCCGGTCATCGCGCTGGAGGCCTAC
GCCTACGCCGCTCGCGTCGCCGAGGTCGAGAATCCCAAGTGTCATCTTGCGTGGACCACGCTGGCGGGCATCGGGCGGGT
GGAGAGTCACCACGGAACCTACCGGGGCGCCACGATTGCGCCCAATGGGGATGTAAGCCCCCCGATTCGGGGCGTCCGCC
TCGACGGCACCGGCGGCACCCTGCGCATCGTGGACAGGGACGGGGGCGGCCTGGACGGTGACGCCGCGGTGGAGCGTGCG
ATGGGGCCAATGCAGTTCATTTCGGAAACCTGGCGGTTGTACGGGGTCGCTGCCAGAAACGACGGCATCGCCAACGTCGA
CAACATCGATGATGCTGCCCTCTCGGCAGCGGGCTATTTATGCTGGCGTGGAAAGGATCTCGCGACACCGCGAGGGTGGA
TAACCGCGCTGAGGGCCTACAACAACTCCGTTATCTATGCGCGGGCGGTCCGGGACTGGGCGACCGCGTATGCGGCGGGT
CATCCGCTGTAG

Upstream 100 bases:

>100_bases
AGGCATGCGATAACCGCCCCGAGTGCGACGGGGTAGTCAACAAACCCATGGGACGATGATCGTGACGGAAGCCGGTATAG
GTGCCCTACGAGGGAGAGTT

Downstream 100 bases:

>100_bases
CAGGATGAACCGCTAACCCAGGCTTTACGCTAACAGCGGTCGGGGCCAGCCAACCCAAGACCGTCCGTGCAGCAGCTACG
ACGCAAGGAGAACCCAGTGC

Product: putative lipoprotein lpqU

Products: NA

Alternate protein names: Membrane-Bound Lytic Murein Transglycosylase B-Like Protein; Membrane-Bound Lytic Murein Transglycosylase B; Lipoprotein LpqU; Lytic Transglycosylase Catalytic; NLP/P60-Family Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B-Like; Transglycosylase; LpqU Protein; LOW QUALITY PROTEIN Secreted Protein; Membrane-Bound Lytic Murein Transglycosylase B Protein; Membrane-Bound Lytic Murein Transglycosylase; Cell Wall-Associated Hydrolase Invasion-Associated Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAY
AYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERA
MGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG
HPL

Sequences:

>Translated_243_residues
MSPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAY
AYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERA
MGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG
HPL
>Mature_242_residues
SPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYA
YAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAM
GPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH
PL

Specific function: Unknown

COG id: COG2951

COG function: function code M; Membrane-bound lytic murein transglycosylase B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25829; Mature: 25697

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLR
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHCCCCCCCCCEEC
PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN
CCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEECC
DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG
CCCCCCCCCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHCC
HPL
CCC
>Mature Secondary Structure 
SPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLR
CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHCCCCCCCCCEEC
PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN
CCCCCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEECC
DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG
CCCCCCCCCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHCC
HPL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA