| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636892
Identifier: 121636892
GI number: 121636892
Start: 1107710
End: 1108312
Strand: Reverse
Name: 121636892
Synonym: BCG_1020c
Alternate gene names: NA
Gene position: 1108312-1107710 (Counterclockwise)
Preceding gene: 121636897
Following gene: 121636891
Centisome position: 25.34
GC content: 67.16
Gene sequence:
>603_bases ATGAGCAACTCGGCGCAGCGTGACGCGAGGAACTCGCGCGACGAGTCCGCGCGTGCGTCGGACACCGACCGGATACAGAT TGCGCAGTTGCTGGCCTACGCGGCCGAGCAGGGCCGCCTGCAGCTGACCGATTATGAAGACCGGCTGGCGCGGGCCTATG CGGCAACCACCTACCAGGAGCTGGATCGGCTGCGGGCCGATCTGCCGGGGGCGGCGATAGGCCCGCGCAGGGGTGGCGAA TGCAATCCGGCGCCGTCCACGCTGCTGCTGGCGCTACTGGGCGGATTCGAACGACGCGGCCGCTGGAACGTGCCGAAGAA GCTGACCACGTTCACCTTGTGGGGCAGCGGGGTGCTGGATCTGCGCTACGCCGACTTCACCTCGACCGAGGTGGACATCC GTGCGTACTCGATCATGGGGGCGCAGACAATTCTGCTGCCACCCGAAGTCAACGTGGAGATCCACGGTCACCGAGTGATG GGCGGCTTCGACCGCAAGGTGGTCGGGGAGGGCACCCGTGGCGCGCCGACGGTGAGGATCCGCGGCTTCTCGCTGGGGGG TGATGTGGGCATCAAGCGCAAACCCCGCAAGCCACGCAAATAG
Upstream 100 bases:
>100_bases CCCCACTGGGGGTGGGCTACCAAGGAGTCGAACCTGGCAACATTTGCAGTTTCGCCAACACCTCTTGAAGCAAATTCTTG ACGTCGTAGGCTCGTGGACG
Downstream 100 bases:
>100_bases CCGCAAATAGCAAGGTGCGCCGCCCGGTCAGCTCGATGCGGGTGAATCGCCCGCAATGTGCTCGTGTGCCATACTCCGCC GAAAGTTTGGTTCGTGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLARAYAATTYQELDRLRADLPGAAIGPRRGGE CNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEVDIRAYSIMGAQTILLPPEVNVEIHGHRVM GGFDRKVVGEGTRGAPTVRIRGFSLGGDVGIKRKPRKPRK
Sequences:
>Translated_200_residues MSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLARAYAATTYQELDRLRADLPGAAIGPRRGGE CNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEVDIRAYSIMGAQTILLPPEVNVEIHGHRVM GGFDRKVVGEGTRGAPTVRIRGFSLGGDVGIKRKPRKPRK >Mature_199_residues SNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLARAYAATTYQELDRLRADLPGAAIGPRRGGEC NPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLDLRYADFTSTEVDIRAYSIMGAQTILLPPEVNVEIHGHRVMG GFDRKVVGEGTRGAPTVRIRGFSLGGDVGIKRKPRKPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 22053; Mature: 21922
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLARAYAATTYQE CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHH LDRLRADLPGAAIGPRRGGECNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLD HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCEEE LRYADFTSTEVDIRAYSIMGAQTILLPPEVNVEIHGHRVMGGFDRKVVGEGTRGAPTVRI EEECCCCCCEEEEEEEEEECCEEEEECCCCCEEECCEEEECCCCCEEECCCCCCCCEEEE RGFSLGGDVGIKRKPRKPRK EEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SNSAQRDARNSRDESARASDTDRIQIAQLLAYAAEQGRLQLTDYEDRLARAYAATTYQE CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHH LDRLRADLPGAAIGPRRGGECNPAPSTLLLALLGGFERRGRWNVPKKLTTFTLWGSGVLD HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCEEE LRYADFTSTEVDIRAYSIMGAQTILLPPEVNVEIHGHRVMGGFDRKVVGEGTRGAPTVRI EEECCCCCCEEEEEEEEEECCEEEEECCCCCEEECCEEEECCCCCEEECCCCCCCCEEEE RGFSLGGDVGIKRKPRKPRK EEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]