| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636760
Identifier: 121636760
GI number: 121636760
Start: 963497
End: 964525
Strand: Reverse
Name: 121636760
Synonym: BCG_0889c
Alternate gene names: NA
Gene position: 964525-963497 (Counterclockwise)
Preceding gene: 121636763
Following gene: 121636759
Centisome position: 22.05
GC content: 65.11
Gene sequence:
>1029_bases ATGGATCAGATCGGGGCTGACCTCGCTGAGGCCGTCGAGCGTCACCTCACCGAATACGGAGTGCGGGTGCTCGGTGGCCT ATCAGCATTGAACTCCGCGCATCCCGAATCACTAGACCTTGAGATCGACGCTCACCCCCTCACGATCACTGCCCTCTACC TTCCTCACCTGTCGGCAACGGCAGCACTGCAGGCCTGGGATACCGCCGGCGCTGGTTCGCCGCTGCTTGTGGTGGGCCCG CGTCTGCATCCGTCGAGCGCTGAAACGCTGCGGGCTCGCGGACTCTGGTACATCGACGGAGCTGGGAACGCTTATTTGCG GCACCAGGGTGGACTGCTCATCGACGTGCGCGGCCGACGGTCAGCTGTGTCCGCACAACCGGGCACCCTCGGTGACGGAC TGCACAGCGATGGACCGCGTAACCCGTTTACCCCCAAGCGCGCGCAGGTTGTCTGCGTACTGCTTGACGCACCGCAACTG GTCGACGCGCCGCTGCGTGCGATCGCCGCGAGCGCCGGCGTCTCGGTCGGTATGGCCAAGGAGACGATGGATACGTTGCG CACTACCGGCTTCTTCGAACACCTCGGCTCCCGCCGCAGGCTGGTGCGCACCGATGAGCTGCTGGACCTGTGGGCGGCTG CCTATCCGGGGGGTCTGGGCCGGGCCAACAAACTCCTGGTCGCCAGTGGTGATATCCACACGTGGTCCGCACCCGACGGA CTCGCAGTGGCGGTCAGCGGGGAACAGGCCCTGCCCGACGAAATCCGCAATCCCGAATCACTGATGCTCTACGTCGACAC CCCAGCGCCCGGGCTACCCGCCGACCTGCTTATACACAACCGCTGGCACCGCGACCCACACGGCAGCATCGTGATCCGAA AGCTATTCTGGCGCAACCTACCTGACGAGCAACCGGGGTTGGCTCCCACGGCCTTGATCTATGCCGACCTCCTTGCCTCG CGCGAGCCGCGCCAGGTCGAAGTCGCCCACCTCATGAGAAGGCAGGATGAGCGACTCGCCCGATTATGA
Upstream 100 bases:
>100_bases CTCGGATACCGCTACACCTTCCAAGTCGACCAGCTCCGACCTGATATGTTCAATAAATCATTATGTTCAATAAAACTGAA CGTACGGATATACTGAACGC
Downstream 100 bases:
>100_bases CCCGGTCCTCCTGGCCTGGGTGACACCGATCGTCACAGCACTTGCCGACGTCGTGCCGGCTGAACAGCTGATGCTCGTCG GGGCACAGTGCCGCGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MDQIGADLAEAVERHLTEYGVRVLGGLSALNSAHPESLDLEIDAHPLTITALYLPHLSATAALQAWDTAGAGSPLLVVGP RLHPSSAETLRARGLWYIDGAGNAYLRHQGGLLIDVRGRRSAVSAQPGTLGDGLHSDGPRNPFTPKRAQVVCVLLDAPQL VDAPLRAIAASAGVSVGMAKETMDTLRTTGFFEHLGSRRRLVRTDELLDLWAAAYPGGLGRANKLLVASGDIHTWSAPDG LAVAVSGEQALPDEIRNPESLMLYVDTPAPGLPADLLIHNRWHRDPHGSIVIRKLFWRNLPDEQPGLAPTALIYADLLAS REPRQVEVAHLMRRQDERLARL
Sequences:
>Translated_342_residues MDQIGADLAEAVERHLTEYGVRVLGGLSALNSAHPESLDLEIDAHPLTITALYLPHLSATAALQAWDTAGAGSPLLVVGP RLHPSSAETLRARGLWYIDGAGNAYLRHQGGLLIDVRGRRSAVSAQPGTLGDGLHSDGPRNPFTPKRAQVVCVLLDAPQL VDAPLRAIAASAGVSVGMAKETMDTLRTTGFFEHLGSRRRLVRTDELLDLWAAAYPGGLGRANKLLVASGDIHTWSAPDG LAVAVSGEQALPDEIRNPESLMLYVDTPAPGLPADLLIHNRWHRDPHGSIVIRKLFWRNLPDEQPGLAPTALIYADLLAS REPRQVEVAHLMRRQDERLARL >Mature_342_residues MDQIGADLAEAVERHLTEYGVRVLGGLSALNSAHPESLDLEIDAHPLTITALYLPHLSATAALQAWDTAGAGSPLLVVGP RLHPSSAETLRARGLWYIDGAGNAYLRHQGGLLIDVRGRRSAVSAQPGTLGDGLHSDGPRNPFTPKRAQVVCVLLDAPQL VDAPLRAIAASAGVSVGMAKETMDTLRTTGFFEHLGSRRRLVRTDELLDLWAAAYPGGLGRANKLLVASGDIHTWSAPDG LAVAVSGEQALPDEIRNPESLMLYVDTPAPGLPADLLIHNRWHRDPHGSIVIRKLFWRNLPDEQPGLAPTALIYADLLAS REPRQVEVAHLMRRQDERLARL
Specific function: Unknown
COG id: COG4861
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36896; Mature: 36896
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQIGADLAEAVERHLTEYGVRVLGGLSALNSAHPESLDLEIDAHPLTITALYLPHLSAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCHH AALQAWDTAGAGSPLLVVGPRLHPSSAETLRARGLWYIDGAGNAYLRHQGGLLIDVRGRR HHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCEEEEECCCCEEEEECCCEEEEECCCC SAVSAQPGTLGDGLHSDGPRNPFTPKRAQVVCVLLDAPQLVDAPLRAIAASAGVSVGMAK CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHH ETMDTLRTTGFFEHLGSRRRLVRTDELLDLWAAAYPGGLGRANKLLVASGDIHTWSAPDG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCC LAVAVSGEQALPDEIRNPESLMLYVDTPAPGLPADLLIHNRWHRDPHGSIVIRKLFWRNL EEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCHHHHEECCCCCCCCCCEEHHHHHHCCC PDEQPGLAPTALIYADLLASREPRQVEVAHLMRRQDERLARL CCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQIGADLAEAVERHLTEYGVRVLGGLSALNSAHPESLDLEIDAHPLTITALYLPHLSAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCCCHH AALQAWDTAGAGSPLLVVGPRLHPSSAETLRARGLWYIDGAGNAYLRHQGGLLIDVRGRR HHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCEEEEECCCCEEEEECCCEEEEECCCC SAVSAQPGTLGDGLHSDGPRNPFTPKRAQVVCVLLDAPQLVDAPLRAIAASAGVSVGMAK CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHH ETMDTLRTTGFFEHLGSRRRLVRTDELLDLWAAAYPGGLGRANKLLVASGDIHTWSAPDG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEECCCCC LAVAVSGEQALPDEIRNPESLMLYVDTPAPGLPADLLIHNRWHRDPHGSIVIRKLFWRNL EEEEECCCCCCHHHHCCCCEEEEEEECCCCCCCHHHHEECCCCCCCCCCEEHHHHHHCCC PDEQPGLAPTALIYADLLASREPRQVEVAHLMRRQDERLARL CCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA