| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is yfhC [C]
Identifier: 121636752
GI number: 121636752
Start: 951612
End: 952034
Strand: Reverse
Name: yfhC [C]
Synonym: BCG_0881c
Alternate gene names: 121636752
Gene position: 952034-951612 (Counterclockwise)
Preceding gene: 121636755
Following gene: 121636751
Centisome position: 21.76
GC content: 63.83
Gene sequence:
>423_bases ATGCCGGCAGGCATGGCAGGTTTTCGACGATGGGCCCAAACCAATGATCCGACCGCCCACGCCGAGAGCCTTGCCATCCG TGCCGCGTGCACCAAGCTGGGCACTGAGCACCTGGTCGGTACCACTCTCAACGTGCTGGCCCATCCGTGTCCGATGTGCT ATGGATCGCTGTACTACTGCTCACCCGATGAGGTTGTCTTCCTGACGTCGCGTGACGCCTATGAACCGCATTACGTCGAT GACCGCAGGTACTTCGAGCCCGCCACCTTCTACGACGAGTTCGCCAAGGAATGGCAGGACCGGCGCCTGCCGATGCGCCA AGAGCACCGGCCCGATATCAGGGCTGGCGCGGTGGATGTCTACCGGTTCCGGCAGGAACCCAACGGCGGTGAGCGCAGCG CGATCGCCGCTCCGACGGGCTGA
Upstream 100 bases:
>100_bases CCTCGTAGCGTGCGAGGTTGATCGCGGCGTTGTCGTCACGTTGGTGCGTGATCGAACAGCCGTCGCATTGCCATTTTTCG TCCCAGCCGATGTCTTGCAC
Downstream 100 bases:
>100_bases GCGGGCGCCGACCCGCGACCTTGACAGCCCACCACGCCCGCGTTCTATTGTTTGCGTATGTACGCAGATAGTGGACCTGA CCCGTTGCCTGACGATCAGG
Product: putative deaminase
Products: NA
Alternate protein names: Guanine Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein; Cmp/Dcmp Deaminase; Cytosine/Adenosine Deaminase-Like; Deaminase; CMP/DCMP Deaminase
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPAGMAGFRRWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVFLTSRDAYEPHYVD DRRYFEPATFYDEFAKEWQDRRLPMRQEHRPDIRAGAVDVYRFRQEPNGGERSAIAAPTG
Sequences:
>Translated_140_residues MPAGMAGFRRWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVFLTSRDAYEPHYVD DRRYFEPATFYDEFAKEWQDRRLPMRQEHRPDIRAGAVDVYRFRQEPNGGERSAIAAPTG >Mature_139_residues PAGMAGFRRWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYCSPDEVVFLTSRDAYEPHYVDD RRYFEPATFYDEFAKEWQDRRLPMRQEHRPDIRAGAVDVYRFRQEPNGGERSAIAAPTG
Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]
COG id: COG0590
COG function: function code FJ; Cytosine/adenosine deaminases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15901; Mature: 15770
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGMAGFRRWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYC CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHCCEEEE SPDEVVFLTSRDAYEPHYVDDRRYFEPATFYDEFAKEWQDRRLPMRQEHRPDIRAGAVDV CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH YRFRQEPNGGERSAIAAPTG HHHCCCCCCCCCCEECCCCC >Mature Secondary Structure PAGMAGFRRWAQTNDPTAHAESLAIRAACTKLGTEHLVGTTLNVLAHPCPMCYGSLYYC CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHCCEEEE SPDEVVFLTSRDAYEPHYVDDRRYFEPATFYDEFAKEWQDRRLPMRQEHRPDIRAGAVDV CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH YRFRQEPNGGERSAIAAPTG HHHCCCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA