Click here to switch to the map view.

The map label for this gene is lipC

Identifier: 121636132

GI number: 121636132

Start: 292744

End: 293985

Strand: Direct

Name: lipC

Synonym: BCG_0257

Alternate gene names: NA

Gene position: 292744-293985 (Clockwise)

Preceding gene: 121636131

Following gene: 121636133

Centisome position: 6.69

GC content: 65.54

Gene sequence:

>1242_bases
ATGAACCAGCGACGCGCCGCCGGGTCAACCGGTGTGGCCTACATCAGATGGTTGCTACGTGCCCGTCCCGCTGACTATAT
GCTGGCCTTGAGTGTCGCCGGGGGTTCGCTACCGGTGGTGGGTAAGCACCTCAAGCCGCTCGGCGGCGTTACTGCCATCG
GCGTCTGGGGCGCCCGGCACGCATCCGATTTCTTGTCCGCGACGGCGAAGGATTTACTGACCCCCGGTATCAACGAGGTT
CGCCGTCGAGATCGTGCCAGCACGCAGGAGGTTTCCGTCGCGGCCTTACGCGGCATCGTTTCGCCCGACGACCTTGCCGT
CGAATGGCCGGCGCCGGAGCGCACGCCGCCGGTCTGCGGGGCGCTGCGCCACCGCCGTTACGTCCACCGCCGTCGCGTCC
TCTACGGCGACGACCCGGCCCAGTTGCTCGACGTATGGCGCCGCAAAGATATGCCCACCAAACCCGCGCCGGTGTTGATC
TTCGTCCCAGGCGGTGCCTGGGTGCACGGCAGTCGCGCCATCCAGGGGTATGCGGTGCTGTCTCGGCTGGCCGCACAGGG
GTGGGTGTGCCTATCGATCGACTACCGGGTCGCACCGCATCACCGCTGGCCACGACACATCCTGGATGTCAAGACCGCCA
TCGCGTGGGCACGGGCCAATGTCGACAAATTCGGCGGTGACCGCAATTTCATTGCGGTGGCTGGTTGTTCGGCCGGCGGC
CACTTGTCCGCGCTGGCCGGGCTCACCGCCAACGACCCGCAATATCAGGCCGAGCTGCCAGAGGGCTCCGACACGTCGGT
CGACGCGGTGGTGGGGATTTACGGCCGCTACGACTGGGAGGACCGCTCCACCCCGGAACGTGCCCGGTTCGTCGATTTTC
TGGAGCGGGTAGTGGTTCAGCGCACGATTGATCGTCACCCCGAAGTGTTCCGTGACGCGTCGCCGATCCAACGAGTCACC
AGAAATGCACCGCCATTCCTGGTGATTCATGGCAGCCGTGACTGTGTCATCCCGGTTGAGCAGGCGCGGAGCTTTGTCGA
GCGGTTACGAGCGGTCTCCCGCTCACAGGTTGGCTACCTGGAGCTGCCCGGTGCGGGCCACGGCTTCGACCTGCTAGACG
GCGCTCGCACCGGCCCGACGGCACACGCGATCGCGCTGTTTCTCAACCAGGTTCATCGCAGCCGGGCACAGTTCGCGAAA
GAGGTCATCCAAACGCCGGCCAATTGTATGGTCGCCCTATGA

Upstream 100 bases:

>100_bases
CGCGGCCGCTTACGCCATTCGGCTGGTGGTGGCGCACGTGAGGCGGCGCCGAGCGGGGTGTTCGCGGGTCGACGCGATCG
ACGAGGAGTAGGCTCCCACC

Downstream 100 bases:

>100_bases
GTAGGGGGCTGCGGTGAAACGGCTCAGCGGCTGGGACGCGGTACTGCTTTACAGCGAGACCCCGAATGTGCACATGCACA
CACTCAAGGTCGCCGTGATC

Product: putative esterase lipC

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Domain-Containing Protein; Lipase; Esterase/Lipase; Lipase/Esterase; Esterase/Lipase-Like Protein; Esterase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Esterase/Lipase/Thioesterase; Carboxylesterase Family Protein; Alpha/Beta Hydrolase Fold Domain Protein; Carboxylesterase; Esterase LipO; Pectinesterase; Esterase/Lipase-Like; Hydrolase; Esterase LipC; Peptidase S; Carboxylesterase LipQ; Membrane-Bound Esterase LipM; Alpha/Beta Hydrolase Family Protein; Dipeptidyl Aminopeptidases/Acylaminoacyl-Peptidases-Like; Triacylglycerol Lipase; Conserved Domain Protein; Alpha/Beta Hydrolase Fold Protein-3 Domain Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Prolyl Oligopeptidase Family Protein; Membrane-Anchored Peptidase; Arylformamidase; Alpha/Beta Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Carboxylesterase Type B; Peptidase S9A/B/C Families; Para-Nitrobenzyl Esterase; Coagulation Factor 5/8 Type Domain Protein; Lipase/Esterase Protein; Esterase LipM; Lipoprotein; Dienelactone Hydrolase

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLKPLGGVTAIGVWGARHASDFLSATAKDLLTPGINEV
RRRDRASTQEVSVAALRGIVSPDDLAVEWPAPERTPPVCGALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLI
FVPGGAWVHGSRAIQGYAVLSRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVDKFGGDRNFIAVAGCSAGG
HLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWEDRSTPERARFVDFLERVVVQRTIDRHPEVFRDASPIQRVT
RNAPPFLVIHGSRDCVIPVEQARSFVERLRAVSRSQVGYLELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFAK
EVIQTPANCMVAL

Sequences:

>Translated_413_residues
MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLKPLGGVTAIGVWGARHASDFLSATAKDLLTPGINEV
RRRDRASTQEVSVAALRGIVSPDDLAVEWPAPERTPPVCGALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLI
FVPGGAWVHGSRAIQGYAVLSRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVDKFGGDRNFIAVAGCSAGG
HLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWEDRSTPERARFVDFLERVVVQRTIDRHPEVFRDASPIQRVT
RNAPPFLVIHGSRDCVIPVEQARSFVERLRAVSRSQVGYLELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFAK
EVIQTPANCMVAL
>Mature_413_residues
MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLKPLGGVTAIGVWGARHASDFLSATAKDLLTPGINEV
RRRDRASTQEVSVAALRGIVSPDDLAVEWPAPERTPPVCGALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLI
FVPGGAWVHGSRAIQGYAVLSRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVDKFGGDRNFIAVAGCSAGG
HLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWEDRSTPERARFVDFLERVVVQRTIDRHPEVFRDASPIQRVT
RNAPPFLVIHGSRDCVIPVEQARSFVERLRAVSRSQVGYLELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFAK
EVIQTPANCMVAL

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45337; Mature: 45337

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00122 CARBOXYLESTERASE_B_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLKPLGGVTAIGVWGARH
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCHH
ASDFLSATAKDLLTPGINEVRRRDRASTQEVSVAALRGIVSPDDLAVEWPAPERTPPVCG
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
ALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLIFVPGGAWVHGSRAIQGYAVL
HHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCHHHHHHHHH
SRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVDKFGGDRNFIAVAGCSAGG
HHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCC
HLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWEDRSTPERARFVDFLERVVVQ
CHHHHHCCCCCCCCCEEECCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RTIDRHPEVFRDASPIQRVTRNAPPFLVIHGSRDCVIPVEQARSFVERLRAVSRSQVGYL
HHHHCCHHHHHCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCEE
ELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFAKEVIQTPANCMVAL
ECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MNQRRAAGSTGVAYIRWLLRARPADYMLALSVAGGSLPVVGKHLKPLGGVTAIGVWGARH
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEECCCCHH
ASDFLSATAKDLLTPGINEVRRRDRASTQEVSVAALRGIVSPDDLAVEWPAPERTPPVCG
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
ALRHRRYVHRRRVLYGDDPAQLLDVWRRKDMPTKPAPVLIFVPGGAWVHGSRAIQGYAVL
HHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCHHHHHHHHH
SRLAAQGWVCLSIDYRVAPHHRWPRHILDVKTAIAWARANVDKFGGDRNFIAVAGCSAGG
HHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCC
HLSALAGLTANDPQYQAELPEGSDTSVDAVVGIYGRYDWEDRSTPERARFVDFLERVVVQ
CHHHHHCCCCCCCCCEEECCCCCCCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RTIDRHPEVFRDASPIQRVTRNAPPFLVIHGSRDCVIPVEQARSFVERLRAVSRSQVGYL
HHHHCCHHHHHCCHHHHHHHCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCEE
ELPGAGHGFDLLDGARTGPTAHAIALFLNQVHRSRAQFAKEVIQTPANCMVAL
ECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA