| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is blh [H]
Identifier: 120613349
GI number: 120613349
Start: 5263823
End: 5264749
Strand: Direct
Name: blh [H]
Synonym: Aave_4719
Alternate gene names: 120613349
Gene position: 5263823-5264749 (Clockwise)
Preceding gene: 120613344
Following gene: 120613355
Centisome position: 98.34
GC content: 72.06
Gene sequence:
>927_bases ATGACATCCCTTTCCCTGCCCTCTTCCACCGGAGCGACCTCCACGGTGCAGCCGTTCTACGATGGCGCGACCGGAACCGT GTCCTACGTGGTCTGGGACCATGCCACCCGCCAGGCGGCGGTGATCGATCCGGTGCTGGACTACGACCCCGATGCCGGAC GCACGCACGGCGCTTCCGCGCGGCGGCTGCTGGACTACCTGCAGGCCGAGCGCCTGGTCGTGGAATGGATCCTGGAAACA CATGCCCATGCGGACCACCTCTCCGCCGCCCGCCACATCCAGGCGGCCAAGGGCGGCAAGGTGGCCATCGGGGCAGCCAT CCGCACGGTGCAGCGCACCTTCGGCCCGCTGTTCGGCATGGAGCCCTCCGCACAGGACGACAGTTTCGACCACCTGTTCG AGGACGGCGAAGTGTTCCGCATCGGCGCCACCCGGGCGGAGGCGATCGGTGTGCCGGGCCATACGCCGGCGGACATGGCC TACCGGATCGACGGGGCGGTGTTCGTGGGCGACACGCTGTTCCTGCCCGACGTGGGCACGGCCCGGGCGGACTTCCCCGG CGGGGATGCCGCGGCCCTCTACCGCTCCATCCAGCGGCTGCTGGCACTGCCGGGGGACACGCGCATGTTCGTGTGCCACG ACTACCCGCCCGCGGGCCGGGCGCCGGCCTGCGAGACGACGGTGGAGGCCCAGCGGCGGAGCAACATCCACGTGGGCCGG CAGGCTGGCGAGCGCGCCTTCGTGGCGCTGCGCCAGGCGCGCGACGCCACCCTGGCCGTGCCGCGCCTGCTGCTGCCGTC GATCCAGGTGAACGTCCGCGGCGGCCGGCTGCCGGACCCGGGGCCGGAAGGCATCGCGTACCTGCGCATACCGCTGAACG TGTTCGGCAGCGCGGATGCCCTTTCCGGCGCCACGCCCGCCTCCTGA
Upstream 100 bases:
>100_bases GGTGGAGGAAAGGGACGGCATGGAGGGGATGTCAGACGGCGTTGACATCAATATATCAAAAAACATAATATTTAAAAACA TACTGATGGACGGAGCCGCC
Downstream 100 bases:
>100_bases GGTGGCATGGCTGCTCTCCTACCCGCGTTCAGGCAGGGTGCCCACCGCCCCGCCGCCCCGGCTGCGCGATGCTGCAGGCA TCGGCCAGCCCTCCGCCGGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTSLSLPSSTGATSTVQPFYDGATGTVSYVVWDHATRQAAVIDPVLDYDPDAGRTHGASARRLLDYLQAERLVVEWILET HAHADHLSAARHIQAAKGGKVAIGAAIRTVQRTFGPLFGMEPSAQDDSFDHLFEDGEVFRIGATRAEAIGVPGHTPADMA YRIDGAVFVGDTLFLPDVGTARADFPGGDAAALYRSIQRLLALPGDTRMFVCHDYPPAGRAPACETTVEAQRRSNIHVGR QAGERAFVALRQARDATLAVPRLLLPSIQVNVRGGRLPDPGPEGIAYLRIPLNVFGSADALSGATPAS
Sequences:
>Translated_308_residues MTSLSLPSSTGATSTVQPFYDGATGTVSYVVWDHATRQAAVIDPVLDYDPDAGRTHGASARRLLDYLQAERLVVEWILET HAHADHLSAARHIQAAKGGKVAIGAAIRTVQRTFGPLFGMEPSAQDDSFDHLFEDGEVFRIGATRAEAIGVPGHTPADMA YRIDGAVFVGDTLFLPDVGTARADFPGGDAAALYRSIQRLLALPGDTRMFVCHDYPPAGRAPACETTVEAQRRSNIHVGR QAGERAFVALRQARDATLAVPRLLLPSIQVNVRGGRLPDPGPEGIAYLRIPLNVFGSADALSGATPAS >Mature_307_residues TSLSLPSSTGATSTVQPFYDGATGTVSYVVWDHATRQAAVIDPVLDYDPDAGRTHGASARRLLDYLQAERLVVEWILETH AHADHLSAARHIQAAKGGKVAIGAAIRTVQRTFGPLFGMEPSAQDDSFDHLFEDGEVFRIGATRAEAIGVPGHTPADMAY RIDGAVFVGDTLFLPDVGTARADFPGGDAAALYRSIQRLLALPGDTRMFVCHDYPPAGRAPACETTVEAQRRSNIHVGRQ AGERAFVALRQARDATLAVPRLLLPSIQVNVRGGRLPDPGPEGIAYLRIPLNVFGSADALSGATPAS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=215, Percent_Identity=28.3720930232558, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1787158, Length=200, Percent_Identity=28.5, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17538952, Length=256, Percent_Identity=24.21875, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI221330176, Length=260, Percent_Identity=28.0769230769231, Blast_Score=85, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32773; Mature: 32642
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSLPSSTGATSTVQPFYDGATGTVSYVVWDHATRQAAVIDPVLDYDPDAGRTHGASA CCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCEEECHHHCCCCCCCCCCCHHH RRLLDYLQAERLVVEWILETHAHADHLSAARHIQAAKGGKVAIGAAIRTVQRTFGPLFGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCC EPSAQDDSFDHLFEDGEVFRIGATRAEAIGVPGHTPADMAYRIDGAVFVGDTLFLPDVGT CCCCCCCCHHHHHCCCCEEEEECCHHHEECCCCCCCCCEEEEECCEEEECCEEECCCCCC ARADFPGGDAAALYRSIQRLLALPGDTRMFVCHDYPPAGRAPACETTVEAQRRSNIHVGR CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECH QAGERAFVALRQARDATLAVPRLLLPSIQVNVRGGRLPDPGPEGIAYLRIPLNVFGSADA HCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECEECCCCCC LSGATPAS CCCCCCCC >Mature Secondary Structure TSLSLPSSTGATSTVQPFYDGATGTVSYVVWDHATRQAAVIDPVLDYDPDAGRTHGASA CCCCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCEEECHHHCCCCCCCCCCCHHH RRLLDYLQAERLVVEWILETHAHADHLSAARHIQAAKGGKVAIGAAIRTVQRTFGPLFGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHCCC EPSAQDDSFDHLFEDGEVFRIGATRAEAIGVPGHTPADMAYRIDGAVFVGDTLFLPDVGT CCCCCCCCHHHHHCCCCEEEEECCHHHEECCCCCCCCCEEEEECCEEEECCEEECCCCCC ARADFPGGDAAALYRSIQRLLALPGDTRMFVCHDYPPAGRAPACETTVEAQRRSNIHVGR CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECH QAGERAFVALRQARDATLAVPRLLLPSIQVNVRGGRLPDPGPEGIAYLRIPLNVFGSADA HCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEECEECCCCCC LSGATPAS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]