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The map label for this gene is ssb [H]

Identifier: 120613344

GI number: 120613344

Start: 5260831

End: 5261394

Strand: Direct

Name: ssb [H]

Synonym: Aave_4713

Alternate gene names: 120613344

Gene position: 5260831-5261394 (Clockwise)

Preceding gene: 120613342

Following gene: 120613349

Centisome position: 98.28

GC content: 70.92

Gene sequence:

>564_bases
ATGGCATCCGTCAACAAAGTCATCATCGTCGGCAACCTCGGGCGCGACCCCGAGATGCGCACCTTCCCCAGCGGCGACCA
GGTCGCCAACGTCACCATCGCCACCACCGACCGCTGGCGCGACAAGAACACCGGCGAGAACAAGGAAGCCACCGAGTGGC
ACCGCGTCGTCTTCAACGGCCGCCTGGCCGAGATCGTGGGCCAGTACCTGCGCAAGGGCTCCCAGGTCTATGTCGAAGGC
AGCCTGCGCACCCGCAAGTGGACCGACCAGTCGGGCCAGGAAAAGTACACGACGGAAATCCGGGCCGACACCATGCAGAT
GCTCGGCAGCCGCCAGGGCATGGGCGGCGGCCAGGGTGGCGGCGGCTATGACGACGGTGGCTACGGCGGTGGCGACGATG
GCTACGGCGGCGGCAACAGCGCCCCGGCGCCCGCGCGCCGCCCTGCGCCCCAGGCCGCCGCGCCGCGCCCGGCACCGGCT
CCCCGCCCTGCACCGGCCCCTGCGGCCCAGGCACCGCGTGCGGCGTCGGGGTTCGACGACATGGACGACGATATCCCGTT
CTGA

Upstream 100 bases:

>100_bases
CTTGGGGCACAATCCCCGCTCCCTCTTCGCGGCGCCCCCGTGGCCGCCGCGCAGGCCGTAGTGCCTTTCCTCCACCATTC
TCTACAGGCCCCTTCACACC

Downstream 100 bases:

>100_bases
TCCACCAATGCCATCGCACCGCTTGGCCGGTACGACAGAGCCCCGCACGCCATCGGCCTGCGGGGCTTTTTTCTTCCTGA
CGTGATGACCTGGCATCCGA

Product: single-strand-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MASVNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEG
SLRTRKWTDQSGQEKYTTEIRADTMQMLGSRQGMGGGQGGGGYDDGGYGGGDDGYGGGNSAPAPARRPAPQAAAPRPAPA
PRPAPAPAAQAPRAASGFDDMDDDIPF

Sequences:

>Translated_187_residues
MASVNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEG
SLRTRKWTDQSGQEKYTTEIRADTMQMLGSRQGMGGGQGGGGYDDGGYGGGDDGYGGGNSAPAPARRPAPQAAAPRPAPA
PRPAPAPAAQAPRAASGFDDMDDDIPF
>Mature_186_residues
ASVNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATEWHRVVFNGRLAEIVGQYLRKGSQVYVEGS
LRTRKWTDQSGQEKYTTEIRADTMQMLGSRQGMGGGQGGGGYDDGGYGGGDDGYGGGNSAPAPARRPAPQAAAPRPAPAP
RPAPAPAAQAPRAASGFDDMDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=120, Percent_Identity=68.3333333333333, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19839; Mature: 19708

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATEWHRVVFNG
CCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RLAEIVGQYLRKGSQVYVEGSLRTRKWTDQSGQEKYTTEIRADTMQMLGSRQGMGGGQGG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGYDDGGYGGGDDGYGGGNSAPAPARRPAPQAAAPRPAPAPRPAPAPAAQAPRAASGFDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MDDDIPF
CCCCCCC
>Mature Secondary Structure 
ASVNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATEWHRVVFNG
CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC
RLAEIVGQYLRKGSQVYVEGSLRTRKWTDQSGQEKYTTEIRADTMQMLGSRQGMGGGQGG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
GGYDDGGYGGGDDGYGGGNSAPAPARRPAPQAAAPRPAPAPRPAPAPAAQAPRAASGFDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MDDDIPF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]