| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613254
Identifier: 120613254
GI number: 120613254
Start: 5141102
End: 5141959
Strand: Direct
Name: 120613254
Synonym: Aave_4621
Alternate gene names: NA
Gene position: 5141102-5141959 (Clockwise)
Preceding gene: 120613248
Following gene: 120613257
Centisome position: 96.05
GC content: 74.94
Gene sequence:
>858_bases ATGAGCGCCCTTCCGCCCGCCCTGCCCGCCGCCATGCCGGAGCCGACCGCGCACGATGCCTGGGTGGACTCGGCCCGCGG CCGGCTGTTCGCCCGCCGCTGGCAGCCTGCGCCGCGCGATGCAAGCCCCGCCACAGTGCCGGCTCCCGTGATCCTCTTCC ATGACTCGCTGGGCTGCGTGGCGCTGTGGCGCGACTTTCCCGCGGCGCTGTGCCGGGCCACCGGCCGCGACGTGATCGCC TACGACCGGCCGGGCTTCGGCCGCGCCGATCCCTGCACGGGCGCGCTACCGACGGATTTCATCGCGGCCGAGGCACGCAC CAGCCTGCCCGCGCTGCGTTCGGAATTCGGCATCGGCCGCTACGTGGCGCTCGGCCACAGCGTGGGAGGGGCCATGGCCG CCCATTGCGCGGCGGACGGCAGCGGCACGGGCGATTGCATCGCCCTCGTCACCGTGGCCGCGCAGGCCTGCGTGGAAGAA CGCACGCTGGCGGGCATCCGCGAGGCACGCGACCAGTTCCAGCGCAGCCCCGAGGCGCTGCAGCGGCTCGCCCGCCACCA CGATGGCGACGAGGGCAAGGCGCGGTGGGTGCTGAATGCCTGGGTGGATACCTGGCTGCACCCCGGTTTTGCCGGCTGGT CGCAGGCCGATGTGCTGGCGCGCGTGGCTTGCCCCGTGCTCGCCCTGCATGGCGACCGGGACGAATACGGATCCCTCGAG CAGCCCGCGCGCATCGCCCGCTGGGCCGCCGGGCCCGCGCGCGTCGAGATCCTGCCCGGCGCGGCGCATGTGCCGCACCG CGAGCGGCCCCATGAGCTCGCGGAGCGCGTCGCGCGCTTCCTCGCGGACCTGCCGTGA
Upstream 100 bases:
>100_bases AAAATGGGAAAGATTCGGCGGCAGGGAGTATCCCGCATCGCTCCCGGAGCCTGGCACCCCGGTGACGGCCGCACCCCATG GGCCGCCGCACAATGCCGGC
Downstream 100 bases:
>100_bases TCAGGCCTTGGGCGGCCGGTACATCGCGCAGAGCTTGTTGCCGTCCGGATCGCGCAGATAGGCCAGGTACAGCGGGCCCG CGGGGCCTTCGCGGTAGCCC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Lactonase; Hydrolase-Related Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Aryl-Ester Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Serine Hydrolase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSALPPALPAAMPEPTAHDAWVDSARGRLFARRWQPAPRDASPATVPAPVILFHDSLGCVALWRDFPAALCRATGRDVIA YDRPGFGRADPCTGALPTDFIAAEARTSLPALRSEFGIGRYVALGHSVGGAMAAHCAADGSGTGDCIALVTVAAQACVEE RTLAGIREARDQFQRSPEALQRLARHHDGDEGKARWVLNAWVDTWLHPGFAGWSQADVLARVACPVLALHGDRDEYGSLE QPARIARWAAGPARVEILPGAAHVPHRERPHELAERVARFLADLP
Sequences:
>Translated_285_residues MSALPPALPAAMPEPTAHDAWVDSARGRLFARRWQPAPRDASPATVPAPVILFHDSLGCVALWRDFPAALCRATGRDVIA YDRPGFGRADPCTGALPTDFIAAEARTSLPALRSEFGIGRYVALGHSVGGAMAAHCAADGSGTGDCIALVTVAAQACVEE RTLAGIREARDQFQRSPEALQRLARHHDGDEGKARWVLNAWVDTWLHPGFAGWSQADVLARVACPVLALHGDRDEYGSLE QPARIARWAAGPARVEILPGAAHVPHRERPHELAERVARFLADLP >Mature_284_residues SALPPALPAAMPEPTAHDAWVDSARGRLFARRWQPAPRDASPATVPAPVILFHDSLGCVALWRDFPAALCRATGRDVIAY DRPGFGRADPCTGALPTDFIAAEARTSLPALRSEFGIGRYVALGHSVGGAMAAHCAADGSGTGDCIALVTVAAQACVEER TLAGIREARDQFQRSPEALQRLARHHDGDEGKARWVLNAWVDTWLHPGFAGWSQADVLARVACPVLALHGDRDEYGSLEQ PARIARWAAGPARVEILPGAAHVPHRERPHELAERVARFLADLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30578; Mature: 30447
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALPPALPAAMPEPTAHDAWVDSARGRLFARRWQPAPRDASPATVPAPVILFHDSLGCV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHH ALWRDFPAALCRATGRDVIAYDRPGFGRADPCTGALPTDFIAAEARTSLPALRSEFGIGR HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH YVALGHSVGGAMAAHCAADGSGTGDCIALVTVAAQACVEERTLAGIREARDQFQRSPEAL HEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QRLARHHDGDEGKARWVLNAWVDTWLHPGFAGWSQADVLARVACPVLALHGDRDEYGSLE HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCHHCCCCC QPARIARWAAGPARVEILPGAAHVPHRERPHELAERVARFLADLP HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SALPPALPAAMPEPTAHDAWVDSARGRLFARRWQPAPRDASPATVPAPVILFHDSLGCV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHH ALWRDFPAALCRATGRDVIAYDRPGFGRADPCTGALPTDFIAAEARTSLPALRSEFGIGR HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH YVALGHSVGGAMAAHCAADGSGTGDCIALVTVAAQACVEERTLAGIREARDQFQRSPEAL HEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QRLARHHDGDEGKARWVLNAWVDTWLHPGFAGWSQADVLARVACPVLALHGDRDEYGSLE HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCHHCCCCC QPARIARWAAGPARVEILPGAAHVPHRERPHELAERVARFLADLP HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA