| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613257
Identifier: 120613257
GI number: 120613257
Start: 5143380
End: 5144573
Strand: Direct
Name: 120613257
Synonym: Aave_4624
Alternate gene names: NA
Gene position: 5143380-5144573 (Clockwise)
Preceding gene: 120613254
Following gene: 120613259
Centisome position: 96.09
GC content: 66.92
Gene sequence:
>1194_bases ATGTACACCGACGTCCACCAGTTCGAGCCCTTGCTGCCAGCCGACGCCCGGATGGAGCCTCTTCTGGCCAAGGCGCATGA CCTGTCCCGGCTGGCCACCACCCTGGCCGGCACGCGGGTGCCGCCGGAGTTGCGCAGCCTGCTGCGCAGCATGAATTCGT ACTACACCAACCGCATCGAGGGGCAGCACACGCGACCGCACGAAATCGAGCAAGCCCTGCGGCAAGACTTCTCCCAAGAT GCAGCGCTGGCCGCCAGGCAGCGCCTGGCCATCGCGCACATCGAGGCCGAACAAGTGCTGGAGCAGCGCCATACCGGGCC TGAAGGCGCTGGAAAGCTGTACGCGCCGGGGGCGGTGCAGGACATCCACCATGTTTTGTTTTCCCGCTTGCCCGCCGCCG ATCTGTTCACATCCGAGCAGGAGCCCATCGTTCCGGGTGCGCTGCGCGAGCGCGACGTGCGCGTGGGCCAGCATGTGGCC CCCGCCCATGCCACCGTGCCGTTGTTTCTGCAGCGCTGGGCTGCGTTCTATGGCGGCGTGCGCCGGGGCGAGGCGGCCTT GGTGGCCCTGGCCTGCGCGCACCAGCGGCTGGGCTGGGTGCATCCCTTCGTGGATGGCAATGGCCGCGTCATGCGGCTGC ACACCCACACCTGGCTCACGGCACAAGGCTACACAGGCGGGCTGTGGTCGCCCCTCCGCGGCTTTGCACGCAGCACAGAG CGCTATTACGCGCTGCTGGCCGACGCCGACAGCCTGCGCCGTGGCGACCTGGACGGACGCGGCAACCTGAGCGAACAGGC CCTGATCGCGTGGGTCCACTACGTGCTGGACACCTGCCTGGACCAGGTCCGCTTCATGGCAGGTCTGCTGGACTTCGAAG CCATCAAGAACCGAATCGAAGCCTGCCTGGCCTACGAAGCCACCGTGCTCAAACAAGGCGTCCGCCAAGAGGCCCTGCGC GGCCTGCACTACCTGTTCCTGAGCGGCGAAGAAATGCCGCGTGGCGAATTCAAAGCCATGCTCGGGATGAGCGACCGGAG TGCCACCGATGCGCTGGGTGCGCTGGTCAAACGCGGGCTGCTCAAGTCCGACTCGCCACAGGGCAAGGTGCGGTTTGGCC TGCCGCAGCACGCGCTGCGCTTCATGTTTCCGCAGTTGTGGCCCGAGGCGGAGGCGGATTCGGCGAATGTTTGA
Upstream 100 bases:
>100_bases GGATGGTCGGCAAACAACTTGGCAAATAATTCTGCAATTGATCAAAAAAATATTTGATTTCAATTAGTTAGATGCAATTG AATCTTGGCAAAATCGCCTG
Downstream 100 bases:
>100_bases GGGGGCTCCTCAAGTTGGTGTCTCGCAGCTGCCTCGCTGCCAGGGGCTGTGCGGATCGCAGAAGTACACCCGCACGCCCG TGGCCTGGGCGAGTTCACGA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; CAMP-Induced Filamentation Protein; Fic Protein Family; Fic Protein; Fic Family
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MYTDVHQFEPLLPADARMEPLLAKAHDLSRLATTLAGTRVPPELRSLLRSMNSYYTNRIEGQHTRPHEIEQALRQDFSQD AALAARQRLAIAHIEAEQVLEQRHTGPEGAGKLYAPGAVQDIHHVLFSRLPAADLFTSEQEPIVPGALRERDVRVGQHVA PAHATVPLFLQRWAAFYGGVRRGEAALVALACAHQRLGWVHPFVDGNGRVMRLHTHTWLTAQGYTGGLWSPLRGFARSTE RYYALLADADSLRRGDLDGRGNLSEQALIAWVHYVLDTCLDQVRFMAGLLDFEAIKNRIEACLAYEATVLKQGVRQEALR GLHYLFLSGEEMPRGEFKAMLGMSDRSATDALGALVKRGLLKSDSPQGKVRFGLPQHALRFMFPQLWPEAEADSANV
Sequences:
>Translated_397_residues MYTDVHQFEPLLPADARMEPLLAKAHDLSRLATTLAGTRVPPELRSLLRSMNSYYTNRIEGQHTRPHEIEQALRQDFSQD AALAARQRLAIAHIEAEQVLEQRHTGPEGAGKLYAPGAVQDIHHVLFSRLPAADLFTSEQEPIVPGALRERDVRVGQHVA PAHATVPLFLQRWAAFYGGVRRGEAALVALACAHQRLGWVHPFVDGNGRVMRLHTHTWLTAQGYTGGLWSPLRGFARSTE RYYALLADADSLRRGDLDGRGNLSEQALIAWVHYVLDTCLDQVRFMAGLLDFEAIKNRIEACLAYEATVLKQGVRQEALR GLHYLFLSGEEMPRGEFKAMLGMSDRSATDALGALVKRGLLKSDSPQGKVRFGLPQHALRFMFPQLWPEAEADSANV >Mature_397_residues MYTDVHQFEPLLPADARMEPLLAKAHDLSRLATTLAGTRVPPELRSLLRSMNSYYTNRIEGQHTRPHEIEQALRQDFSQD AALAARQRLAIAHIEAEQVLEQRHTGPEGAGKLYAPGAVQDIHHVLFSRLPAADLFTSEQEPIVPGALRERDVRVGQHVA PAHATVPLFLQRWAAFYGGVRRGEAALVALACAHQRLGWVHPFVDGNGRVMRLHTHTWLTAQGYTGGLWSPLRGFARSTE RYYALLADADSLRRGDLDGRGNLSEQALIAWVHYVLDTCLDQVRFMAGLLDFEAIKNRIEACLAYEATVLKQGVRQEALR GLHYLFLSGEEMPRGEFKAMLGMSDRSATDALGALVKRGLLKSDSPQGKVRFGLPQHALRFMFPQLWPEAEADSANV
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44231; Mature: 44231
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTDVHQFEPLLPADARMEPLLAKAHDLSRLATTLAGTRVPPELRSLLRSMNSYYTNRIE CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC GQHTRPHEIEQALRQDFSQDAALAARQRLAIAHIEAEQVLEQRHTGPEGAGKLYAPGAVQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DIHHVLFSRLPAADLFTSEQEPIVPGALRERDVRVGQHVAPAHATVPLFLQRWAAFYGGV HHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC RRGEAALVALACAHQRLGWVHPFVDGNGRVMRLHTHTWLTAQGYTGGLWSPLRGFARSTE CCCHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECEEEEECCCCCCCCHHHHHHHHHHH RYYALLADADSLRRGDLDGRGNLSEQALIAWVHYVLDTCLDQVRFMAGLLDFEAIKNRIE HHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLAYEATVLKQGVRQEALRGLHYLFLSGEEMPRGEFKAMLGMSDRSATDALGALVKRGL HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LKSDSPQGKVRFGLPQHALRFMFPQLWPEAEADSANV CCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYTDVHQFEPLLPADARMEPLLAKAHDLSRLATTLAGTRVPPELRSLLRSMNSYYTNRIE CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC GQHTRPHEIEQALRQDFSQDAALAARQRLAIAHIEAEQVLEQRHTGPEGAGKLYAPGAVQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH DIHHVLFSRLPAADLFTSEQEPIVPGALRERDVRVGQHVAPAHATVPLFLQRWAAFYGGV HHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC RRGEAALVALACAHQRLGWVHPFVDGNGRVMRLHTHTWLTAQGYTGGLWSPLRGFARSTE CCCHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECEEEEECCCCCCCCHHHHHHHHHHH RYYALLADADSLRRGDLDGRGNLSEQALIAWVHYVLDTCLDQVRFMAGLLDFEAIKNRIE HHHHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACLAYEATVLKQGVRQEALRGLHYLFLSGEEMPRGEFKAMLGMSDRSATDALGALVKRGL HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH LKSDSPQGKVRFGLPQHALRFMFPQLWPEAEADSANV CCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA