| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613219
Identifier: 120613219
GI number: 120613219
Start: 5105980
End: 5106423
Strand: Direct
Name: 120613219
Synonym: Aave_4586
Alternate gene names: NA
Gene position: 5105980-5106423 (Clockwise)
Preceding gene: 120613218
Following gene: 120613220
Centisome position: 95.39
GC content: 54.73
Gene sequence:
>444_bases ATGGCGGCGGTAATCATGGCGGGCACCTACGCTTATAACGAACTCTCTCAACTTTCTCCAGAGGAGCTTTTCTTCTGGAT AGGTATAGACCAGACCCTGGATCAGCTGGGCGGCGTGGATATTGCTGCTGCAGCGGCCATCCTCTCGGGGCAGCCCATAC TGCCAACGCGCGGCAAGTTCGGAGGTGCCACGCAGGGAACATCCGTGGCTTCCGTCATATCGAGAAGATTACTCCAGCAC CGTTTGCCATTCGCACTGCCAACAATTACAGGAGCCAGCCTGACCACGCTCAAAATAACGTTCACCAAAAACCTGGGGGC CTTCGTGGGCCGTCTGGTTCCCGGTGTCGGCTGGACTATATTGGCATATGACGTTTTTCAGATCGTCAACAAGATGATAA CGACCTACAACGCTCTCGCAAGGGAGGAAGACCGCCTATGGTAA
Upstream 100 bases:
>100_bases CAGGCGCCTGCAAAGACGTCGATGTTGAGTTCATAGAGAGCTATTGAAACCAGCATACCGCCATGTTCGATCGCGTACAT ATCTTCAACGAATGGTGCCC
Downstream 100 bases:
>100_bases GCTCCTCCGACCTGTGGGAACAATTGGTCCAGCTTGCGTCGAACATCGACTCGGTAGGCTTGCGCCAGTTGGGGCGCCGT ATTACCTACACCAGGGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAAVIMAGTYAYNELSQLSPEELFFWIGIDQTLDQLGGVDIAAAAAILSGQPILPTRGKFGGATQGTSVASVISRRLLQH RLPFALPTITGASLTTLKITFTKNLGAFVGRLVPGVGWTILAYDVFQIVNKMITTYNALAREEDRLW
Sequences:
>Translated_147_residues MAAVIMAGTYAYNELSQLSPEELFFWIGIDQTLDQLGGVDIAAAAAILSGQPILPTRGKFGGATQGTSVASVISRRLLQH RLPFALPTITGASLTTLKITFTKNLGAFVGRLVPGVGWTILAYDVFQIVNKMITTYNALAREEDRLW >Mature_146_residues AAVIMAGTYAYNELSQLSPEELFFWIGIDQTLDQLGGVDIAAAAAILSGQPILPTRGKFGGATQGTSVASVISRRLLQHR LPFALPTITGASLTTLKITFTKNLGAFVGRLVPGVGWTILAYDVFQIVNKMITTYNALAREEDRLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15873; Mature: 15741
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVIMAGTYAYNELSQLSPEELFFWIGIDQTLDQLGGVDIAAAAAILSGQPILPTRGKF CCEEEEECHHHHHHHHHCCHHHEEEEEECHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC GGATQGTSVASVISRRLLQHRLPFALPTITGASLTTLKITFTKNLGAFVGRLVPGVGWTI CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCHHH LAYDVFQIVNKMITTYNALAREEDRLW HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAVIMAGTYAYNELSQLSPEELFFWIGIDQTLDQLGGVDIAAAAAILSGQPILPTRGKF CEEEEECHHHHHHHHHCCHHHEEEEEECHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC GGATQGTSVASVISRRLLQHRLPFALPTITGASLTTLKITFTKNLGAFVGRLVPGVGWTI CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCCCHHH LAYDVFQIVNKMITTYNALAREEDRLW HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA