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The map label for this gene is ydhC [C]

Identifier: 120613157

GI number: 120613157

Start: 5026537

End: 5027889

Strand: Direct

Name: ydhC [C]

Synonym: Aave_4524

Alternate gene names: 120613157

Gene position: 5026537-5027889 (Clockwise)

Preceding gene: 120613156

Following gene: 120613183

Centisome position: 93.91

GC content: 69.33

Gene sequence:

>1353_bases
GTGCGCAGATTCGCTAGGCTGGTATCTTCCCGCTCGAGGAATCCGGCCCGCTCCCGCCGCCGTCCGCCCAGCCCCCTTGC
CGTGCCCCAACCCGCCACCCCCACCGCAGAACCCGCGGCAGACCCCGCCCCGCCCTCCCGCGCCCTGTGGGCCATGTTCC
TGTGCCTGCTGTCGGGCTTCGCGCTGAGCCAGGCCTTCCGCACGGTCACCAGCATCATTGCCACGGGCCTGCAGGCCGAC
TTCGGCATCTCGCCCGACTCCCTGGGGGCGTTCGCCGGGCTGTTCGGCCTGTCGTTCGGCGTAGCCCAGCTGCTCATGGG
CATCGGCATGGACCTGTACGGCTTGCGCCGCACGGTGCTGACGGCGTTCCCCATGGCGGTGATCGGCGCGGCGGTATCCG
CCGCTGCGCCGGGCTATGGCTGGTTGATGCTCGGGCAGTTGCTGATCGGCGTGGGCTGTTCGCCGGCTTTCCTGGCCTGC
ACGGTGTTCATTGCCCGGCACTTTCCCGCCCAGCGTTTCGCGTTTTTCTCGGGCGTGGGAATGGGCGTGGGCGGCCTGGG
CCTGATCTTCACGGGCACGCCGCTGGCCTGGCTGGTGCAGCACGGCGGCTGGCGCCTGGGATTCGGGGTGCTGGCGGCGC
TCTCGCTGCTGTCGTGGCTGCTGATCTACCTGCGCGTGCATGAACCGGAACTGCCGCAATCCAATAGTCAGCCGAAAGAA
TCCTGGGGGCAGGCGGCCAGCCGTTTCGCAGACCTGTTCCGCATGCCGCACACCTGGGGCATCCTGGTCCTCGGCATGTG
CTGCTACGCCGCCTTCCTGACGCTGCGCGGCCTGTGGCTGGGGCCGCTGCTGATGGGCCGGTTCGGGTTCTCGCTGGTCG
AGAGCGGCAATGTGGCGCTGGTGCTGTCGCTGATCGCCCTCTTCGTTCCGGCGCTCTTCGGCCGCCTGGACCCGGGTGCG
CAGCGCCGCCGCCGGTGGATCACCTTCTTCTCGCTGCTCATGGGCGGCCTGTTCCTGCTGATGGCGTTCCTGCACCATGC
CGCGGCCACGGTCGTGCTGATCTTCGCGATGGGCCTGCTGTCGGGCTACAGCGTGCTCCAGTACGCCGACGTGCGTTCCT
CCTACCCGGCCGGGATGACGGGCCGTGCGCTGTCGCTCTACACCATGTCGATGTTCCTCGGGGTGGCGCTGATGCAATGG
CTGACCGGGCTGCTGGCCGCCTGGGCGCAGCACCACGGCCATGATCCTTACCGGGCGGTGATGCTCTGCATCGCCGGCAT
GCTGGCGGCGGCCTCGACGGCGTTCAGGTTCTTGCCGCGGTCGCCGTTGCTGCCGCAACGCGGCGCGGCATAA

Upstream 100 bases:

>100_bases
GTAAATTCGACATACAGCCTGCAGGTTGCATGCCCGGATTCACGGTACACGGCAGACCAGCTGCCCGTGCCCGCGCATAT
CCGCGGCGTGACCGCCAACC

Downstream 100 bases:

>100_bases
GCCGGGGCCCGGGAGCAGGCAGGGTCTGGCAATAGAGACTTGCGGAAGGCATCTCGCCCAAGCAAAAAGCCCCTGACCTC
GTAAAAGATCAGGGGCTTTG

Product: major facilitator superfamily transporter

Products: Proton [Cytoplasm]; drug [Periplasm] [C]

Alternate protein names: Facilitator Superfamily Protein; Transporter MFS Superfamily; Facilitator Superfamily Transporter

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MRRFARLVSSRSRNPARSRRRPPSPLAVPQPATPTAEPAADPAPPSRALWAMFLCLLSGFALSQAFRTVTSIIATGLQAD
FGISPDSLGAFAGLFGLSFGVAQLLMGIGMDLYGLRRTVLTAFPMAVIGAAVSAAAPGYGWLMLGQLLIGVGCSPAFLAC
TVFIARHFPAQRFAFFSGVGMGVGGLGLIFTGTPLAWLVQHGGWRLGFGVLAALSLLSWLLIYLRVHEPELPQSNSQPKE
SWGQAASRFADLFRMPHTWGILVLGMCCYAAFLTLRGLWLGPLLMGRFGFSLVESGNVALVLSLIALFVPALFGRLDPGA
QRRRRWITFFSLLMGGLFLLMAFLHHAAATVVLIFAMGLLSGYSVLQYADVRSSYPAGMTGRALSLYTMSMFLGVALMQW
LTGLLAAWAQHHGHDPYRAVMLCIAGMLAAASTAFRFLPRSPLLPQRGAA

Sequences:

>Translated_450_residues
MRRFARLVSSRSRNPARSRRRPPSPLAVPQPATPTAEPAADPAPPSRALWAMFLCLLSGFALSQAFRTVTSIIATGLQAD
FGISPDSLGAFAGLFGLSFGVAQLLMGIGMDLYGLRRTVLTAFPMAVIGAAVSAAAPGYGWLMLGQLLIGVGCSPAFLAC
TVFIARHFPAQRFAFFSGVGMGVGGLGLIFTGTPLAWLVQHGGWRLGFGVLAALSLLSWLLIYLRVHEPELPQSNSQPKE
SWGQAASRFADLFRMPHTWGILVLGMCCYAAFLTLRGLWLGPLLMGRFGFSLVESGNVALVLSLIALFVPALFGRLDPGA
QRRRRWITFFSLLMGGLFLLMAFLHHAAATVVLIFAMGLLSGYSVLQYADVRSSYPAGMTGRALSLYTMSMFLGVALMQW
LTGLLAAWAQHHGHDPYRAVMLCIAGMLAAASTAFRFLPRSPLLPQRGAA
>Mature_450_residues
MRRFARLVSSRSRNPARSRRRPPSPLAVPQPATPTAEPAADPAPPSRALWAMFLCLLSGFALSQAFRTVTSIIATGLQAD
FGISPDSLGAFAGLFGLSFGVAQLLMGIGMDLYGLRRTVLTAFPMAVIGAAVSAAAPGYGWLMLGQLLIGVGCSPAFLAC
TVFIARHFPAQRFAFFSGVGMGVGGLGLIFTGTPLAWLVQHGGWRLGFGVLAALSLLSWLLIYLRVHEPELPQSNSQPKE
SWGQAASRFADLFRMPHTWGILVLGMCCYAAFLTLRGLWLGPLLMGRFGFSLVESGNVALVLSLIALFVPALFGRLDPGA
QRRRRWITFFSLLMGGLFLLMAFLHHAAATVVLIFAMGLLSGYSVLQYADVRSSYPAGMTGRALSLYTMSMFLGVALMQW
LTGLLAAWAQHHGHDPYRAVMLCIAGMLAAASTAFRFLPRSPLLPQRGAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48342; Mature: 48342

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA